Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01587 ATGAGGATGAGCTGTAATGGATGTAGAGTCCTTCGTAAGGGATGTAGCGATAACTGCAGCATCAGACCTTGCTTGCAATGGATCAAAAACCCTGAATCCCAAGCCAATGCCACTCTCTTCCTCGCTAAGTTCTACGGTCGTGCCGGTCTCATGAATCTTATCACTTCAGGCCCCGAACATCTCCGCCCTGAGATTTTTCGATCACTGCTCTACGAGGCTTGTGGAAGGATTGTTAATCCTATCTATGGTTCCGTTGGATTGCTCTGGTCTGGCAGTTGGCAGCTTTGCCAAGCAGCCGTTGAAGCTGTCCTCAAAGGAGCGCCGCTCCCGCAAATCCCTTCTGAAACAGCCGTCAGCCCTATTCCTCCTCTCAAAGCCTACGATATACGACACGTATCCAAAGATGAAACCTCTTCCGCTTCTCAGGATCTTCACAAGGTTAAATCACGTAACCGGTTCAAGCGTTCAGCCGTTTCCGCCAAGTCCAACCCCAAGGTTATATCGGGCTCTGCTGATGAACCGGGCCCGGTTTGTAACCTTAGATGGCGCCGGTGTTATCCGGATGATTTTAACCAAGTGCCGAGTCATGAATCGTCTGCGAGTCAGCAATCGGAGCCCAATAGAGAAGGAGATAGCCGAGAGATTGAGAGCATGGTTTCTGTTGAAACGGTTGAGGCTTCGCTTGTGAACCGAGTCGAGTCGGATCTCGTTCCGAAACCTGATGACCAAAACGATGATAGCGAAGTCGAGCTGGAACTGACCCTCGGATTCGAGCCGGTGTCGCATGCCAGCCGCGTACATAGCGTGGATCAAGTGAAGGGAACGAACAAGGTCCACGGTTTCGATCATGACACGTGTAAGATGGAGCTTGGGCTTGATTATCCAGCGTGA 891 0.5118 MRMSCNGCRVLRKGCSDNCSIRPCLQWIKNPESQANATLFLAKFYGRAGLMNLITSGPEHLRPEIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPLPQIPSETAVSPIPPLKAYDIRHVSKDETSSASQDLHKVKSRNRFKRSAVSAKSNPKVISGSADEPGPVCNLRWRRCYPDDFNQVPSHESSASQQSEPNREGDSREIESMVSVETVEASLVNRVESDLVPKPDDQNDDSEVELELTLGFEPVSHASRVHSVDQVKGTNKVHGFDHDTCKMELGLDYPA* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01587 296 MobiDBLite consensus disorder prediction 135 173 - -
Eupl04g01587 296 MobiDBLite consensus disorder prediction 192 206 - -
Eupl04g01587 296 MobiDBLite consensus disorder prediction 191 215 - -
Eupl04g01587 296 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Eupl04g01587 296 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Eupl04g01587 296 PIRSF AS2 1 295 IPR017414 -
Eupl04g01587 296 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01587 Eupl-Chr4 27954528 27956174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01587 1 292 AS2 family AT3G02550 52.145 3.18e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl04g01587 LOB 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01587 - - msin:131234978 447.203