Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01566 ATGGCCGGCGACGAGCAAGAAACCCAGAGAAAGCACCGTCGGTCCCCCGACGAAGATGCCGAGGAGGGCTCGAAGCGTCGGAAGCATAGCCACCATCGCCACCACCATCGGCATCGGCATCGCCATCGCAGCAGCAAACACGAAGGAGAGGACCTCTCTCTTCCTCCTCCTCCTTTTGCTGTCGCAAGCTCTAATTCCCGACCCGATGACGATAAAGAAGAAGGAGAAATTCTCGAAGAAGAAGATTACGTTGTCGCTAATGGAAATAACTTATCAAAGAACAAAGCGGAGTCTGATGTTGAGTCCGGTGAGATTAAGCCGGATGAAATTGCCGACAAATCGGATAATCGGAATCTGGCGATTCATGGTGGGGGAGATACCTTTTCCGGTAAAGCTCCTGAAGAGTATGAGCTTAATCTTAATCTGCCGCCTGAGGACGGCAGAGGGGAAAATGCTCGAAGTTCAAAGACATCCACAGATGACAGGGATGAACACTCCAGTGGTGAGGAGTATGGAGTGGGAGAAATTGATGGATCAAGTGCTGGATTTGAATTATCCAAATCCAAGGAGAAAAAGGGGGGAAGGCGGCATAGGGATGGGCAGAAATCTTCTAAAGGGGATCTGAAGACACGAAGAGGATCTGAGTCCCCTTTAGAAGGTACTGGAAAGGAAAAGAATCAAAGGGACGTTGAAGCAACTGATTTGGGAAGTCATGGTAGGTCTAGATCACCAGTAGCCAGAGTAGATGTTGACTCGAGGAAGCACAGGAAAATAGATGATCGTGGTGGTAAATCTGATCGTTCTAGAGATGTGGAACAACACAATGCGACGAGATACGAGTCTAAGAGACCTGTGGAATCAGTGGAAACTGATAAAAATGGTTTAGGGAATAGGAATAAATCGGTGTCCCCTGAAAGTACAAGGGACAAGTACAAGACCTTGGCACACTCTCCATCTCACGACAGATACCACGATGAGGCCCATACTAGGAACAGATCAAGGTCACGTGATTTTGCAAGAGAGAGATCACGATCTCGAAGTATAGTACAAGATGGGAAAGTTCATTATCATGAACGGGAGGCCAAGTCTTATATTGACATCAATGATCAAGTGAAACTGTCTAATTCACGAGAAAAGGCTAAAATTGATTCTGATCGTGGAAGAATAGTTACGCACGATAGGGAGGAGCGGCATGGTAGCAGAGACTGGGTGAGGGATAGGGAAAGAGGACGGAGTAGTAGCCATAGCAGACAGAGTGGGCGAGATGACAGGCATGGCAGTCGGGACATTCGGGACAGAGATAGGGAGAGGGAGAGGGAAAGGGAAAGGGAAAGGGAAAGGGACAGGGACAGGGACAGGGACAGGGACAGGGATAGGGATAGGCAAAGGGAAAGGGAAAGGGAAAGGGATAGAGACAAGGATAGGGACAGGGTTAGCGATAGAGATAGAGACATGGATAGGCTTAGGGAGAGACAGAGGGAGAAGGTGAGGGTTAGAGATAGAGATAGAGGTTGGGAGATGGAAGTTGACAGTGTTGGTAGGCATTATAAATATGATGGTGGTCTTGAAGACGGTTATGGTGGTCGAGATAGGTATAAGGATTCTTGGCATAAAAAACATGATGAACCAGAACATTACCGGGACAGAACAAGATCAAAAGATACAGCAAAGATATCCAGATTAAAAAATGATGATTCAGAAGGCAGCAACGAAAAACTAAAAAGAGGTGAAGATGAACAAGAAGACTATCAAGAAAGGGTTGCATTGAAACTTGCGGAACAGGAAGAGGAAGATATTGACAGAATTACGGAGGAGAGTAGAAAACGAAGGCAAGCCATCCTAGAAAAATATAGACAACAGCAGTCACAGCAACAGGTTGAATCTCATGCCGAAGATCCAGGCGAAGAGAAGGGTGATGTCGCTGTTGACAAGTCAGCAGAGCAGTCTTCTACTCCAAAAGATGCTGTAGATGCCTTTCTTGAAGGTCTTGGAAGTAGGAATTACTGTTCAGATGCTGATGTTGCTGACCCACTGTTTTCTGTTGGGAAATCGCCTGCACAAAATGGAACTTTGGCATTTGAGAGAATACCAGGTGCTGGGGGACTAGGCGATGGTTCTCCTAAGAGTGAGAGATCAGCAGATATGTTTTGTGATGATATTTTTGGAGAATCGCCTGCTGGAGTTCGTAAATCGGGGAAGGGGGATGGTTTACAAGTTGAAAGGAGTGGTCTTCATGACAATTGGGATGATGCGGAAGGTTACTACAGCTACCGATTTGGAGAAGTACTTGATGGCAGATATGAGGTTACTGCTGCTCACGGAAAAGGTGTTTTTTCAACTGTAGTTCGTGCAAAGGATCTTAAGGCTGGGAAGGATGATCCTGAAGAAGTGGCCATAAAAATCATTCGCAATAATGACACAATGTACAAGGCAGGTTTGGACGAGCTGGTCATATTGAAGAAGCTAGCTGGTGCAGACCCCGAGGACAGGCGCCATTGTGTTCGCTTTCTCTCAAGTTTTAAGTACCGGAATCATCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTTCGTGAGGTCCTAAAGAAGTTCGGTCGTAATATTGGCCTTAAACTGACTGCTGTGAGGACATATGCGAAGCAGCTTTTTATTGCGTTGAAGCATCTTAGAAACTGTGGTGTTCTGCACTGTGATATAAAGCCTGATAATATGCTGGTAAATGAGGCAAAAAATGTGTTGAAACTGTGTGATTTTGGTAATGCTATGTTTGCTGGTAAAAATGAGATCACACCGTACCTGGTGAGCCGCTTTTATCGTGCCCCTGAAATAATTCTTGGCTTGCCATATGATCATCCCTTGGACATATGGTCTGTTGGTTGCTGTTTGTACGAGCTTTATTCAGGGAAGGTCCTTTTTCCGGGTCCATCAAACAATGACATGCTCCGCCTCCACATGGAATTGAAGGGTCCTTTTCCAAAGAAGTTGCTCCGCAAGGGAGCATTTACCGATCAACATTTTGACCAGGATTTGAATTTTCATGCTACAGAAGAGGATCCTGTTACAAAGAAGACTGTAAAGAGGATGCTTGTCAATATTAAGCCCAAAGATATTGGTACCATAATTACAGGCTCCCTTGGTGAGGATCCCAAGATGTTAGTCAATTTCAAAGATCTTCTAGAAAGAATATTTGTGTTGGATCCAGAGAAGAGGATGACAGTTTCTCAAGCATTGAGCCACGCATTCATCACGGGCAAGTGA 3258 0.4537 MAGDEQETQRKHRRSPDEDAEEGSKRRKHSHHRHHHRHRHRHRSSKHEGEDLSLPPPPFAVASSNSRPDDDKEEGEILEEEDYVVANGNNLSKNKAESDVESGEIKPDEIADKSDNRNLAIHGGGDTFSGKAPEEYELNLNLPPEDGRGENARSSKTSTDDRDEHSSGEEYGVGEIDGSSAGFELSKSKEKKGGRRHRDGQKSSKGDLKTRRGSESPLEGTGKEKNQRDVEATDLGSHGRSRSPVARVDVDSRKHRKIDDRGGKSDRSRDVEQHNATRYESKRPVESVETDKNGLGNRNKSVSPESTRDKYKTLAHSPSHDRYHDEAHTRNRSRSRDFARERSRSRSIVQDGKVHYHEREAKSYIDINDQVKLSNSREKAKIDSDRGRIVTHDREERHGSRDWVRDRERGRSSSHSRQSGRDDRHGSRDIRDRDRERERERERERERDRDRDRDRDRDRDRQRERERERDRDKDRDRVSDRDRDMDRLRERQREKVRVRDRDRGWEMEVDSVGRHYKYDGGLEDGYGGRDRYKDSWHKKHDEPEHYRDRTRSKDTAKISRLKNDDSEGSNEKLKRGEDEQEDYQERVALKLAEQEEEDIDRITEESRKRRQAILEKYRQQQSQQQVESHAEDPGEEKGDVAVDKSAEQSSTPKDAVDAFLEGLGSRNYCSDADVADPLFSVGKSPAQNGTLAFERIPGAGGLGDGSPKSERSADMFCDDIFGESPAGVRKSGKGDGLQVERSGLHDNWDDAEGYYSYRFGEVLDGRYEVTAAHGKGVFSTVVRAKDLKAGKDDPEEVAIKIIRNNDTMYKAGLDELVILKKLAGADPEDRRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRTYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYSGKVLFPGPSNNDMLRLHMELKGPFPKKLLRKGAFTDQHFDQDLNFHATEEDPVTKKTVKRMLVNIKPKDIGTIITGSLGEDPKMLVNFKDLLERIFVLDPEKRMTVSQALSHAFITGK* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01566 1085 FunFam serine/threonine-protein kinase PRP4 homolog 737 826 - -
Eupl04g01566 1085 Gene3D Transferase(Phosphotransferase) domain 1 827 1083 - -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 303 585 - -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 97 116 - -
Eupl04g01566 1085 PANTHER DUAL SPECIFICITY PROTEIN KINASE 441 1083 - -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 1 585 - -
Eupl04g01566 1085 SMART serkin_6 767 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 615 653 - -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 244 289 - -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 27 44 - -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 149 171 - -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 1 26 - -
Eupl04g01566 1085 Gene3D Phosphorylase Kinase; domain 1 737 826 - -
Eupl04g01566 1085 CDD STKc_PRP4 766 1082 IPR044092 GO:0004674|GO:0006468|GO:0045292
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 629 643 - -
Eupl04g01566 1085 FunFam Serine/threonine-protein kinase PRP4 homolog 827 1083 - -
Eupl04g01566 1085 ProSiteProfiles Protein kinase domain profile. 767 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01566 1085 Coils Coil 592 612 - -
Eupl04g01566 1085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 894 906 IPR008271 GO:0004672|GO:0006468
Eupl04g01566 1085 SUPERFAMILY Protein kinase-like (PK-like) 754 1084 IPR011009 -
Eupl04g01566 1085 MobiDBLite consensus disorder prediction 200 236 - -
Eupl04g01566 1085 Pfam Protein kinase domain 769 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01566 Eupl-Chr4 27131764 27144004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01566 766 1083 Core Cell Cycle Gene Families AT1G66750 29.141 1.07e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Eupl04g01566 Pkinase 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01566 K08827 - nnu:104602985 1061.6