Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01546 ATGCAGAGCTTCACAGTAATAGGTGATGAAGGTAGACGTAACCAATCGCGGTTTTCGGATCTTGGTGAGCTCGAACAATCTACTGGATTTCACCATGAAGATACTGTAAATTTGAGTCGAAGTTCGATTTTTAGTTTGAAGTCGTCTGGCAGGGTTGCTGTTGTTACTCCTTTACAGTTTGGCGGATTAAACACGAGCGGTAATGCTTCGGAAATAACTTCGTCAGCGACCGGAGTTGATACGGGGCAGTATTTTCAGAAGCGATCGGCGCCGGTCCCTGCTTCGTTAGGGAACGGGCATTTTGAGAACTGGGGGGAATCTGGCATGGCGGACACTAGTCAACAGACCGACACGTCTACCGATGTCGACACGGATGATAGAAACCAGTTTCGAGGTGTTCAGCGTGGAGCACTTGTATCTGTGGATTCCTTGGATAGATCAGATGGGAAAACAGGAGACCAGAAGACACTTCGTAGGCTTGCTCAAAATCGTGAAGCTGCACGGAAGAGTCGATTAAAGAAGAAAGCCTATGTTCAGCAGCTGGAAAGTAGCCGATTAAAGCTTAATCAACTAGAGCAAGAGCTTCAACGGGCACGGCAGCAGGGTATATTTATTGCAAGTGGATGCGTAGGAGATCAAAGTCATTCAACGGGTGGAAATGGGGCCTTAGCATTTGATATGGACTATGCACGATGGCTTGACGAGCATCAACGGCAGATCAATGACCTGAGGTCAGCTGTAAATTCTCGTGTGGGTGATAATGAGCTGCGCCTTCTAGTTGACGGTGTGATGGCGCACTATGATGAGATATTCAGGCTAAAAAACATAGGTGCAAAGTCTGATGTATTCCACATGCTTTCGGGCATGTGGAAGACACCTGCTGAGAGGTGTTTCATGTGGTTGGGGGGGTTCCGTTCATCTGAACTTCTCAAGATACTTGGAAACCATCTCGAACCCTTAACAGATCAACAGTTGATGGGCATATGTAATCTGCAGCAGTCCTCTCAACAGGCTGAGGATGCTTTGTCTCAGGGAATGGAAGCTTTACAACAATCTCTTGCGGAGACCCTCTCTTCTGGCTCTCTTGGTCCTTCTGGTTCTAGAAACGTTGCTGATTACATGGGTCAGATGGCACTCGCAATGGGCAAGCTGGGCACACTCGAGAACTTTATTCACCAGGCTGATCTGCTGCGGCAACAAACTTTGCAACAAATGCATCGTATATTGACCACTCGTCAAGCAGCCCGTGCCCTGCTTGTTATCAGTGATTACTCCTCACGGCTGCGAGCACTCAGTTCGTTATGGTTGGCACGTCCTAGGGACTAA 1326 0.4804 MQSFTVIGDEGRRNQSRFSDLGELEQSTGFHHEDTVNLSRSSIFSLKSSGRVAVVTPLQFGGLNTSGNASEITSSATGVDTGQYFQKRSAPVPASLGNGHFENWGESGMADTSQQTDTSTDVDTDDRNQFRGVQRGALVSVDSLDRSDGKTGDQKTLRRLAQNREAARKSRLKKKAYVQQLESSRLKLNQLEQELQRARQQGIFIASGCVGDQSHSTGGNGALAFDMDYARWLDEHQRQINDLRSAVNSRVGDNELRLLVDGVMAHYDEIFRLKNIGAKSDVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGPSGSRNVADYMGQMALAMGKLGTLENFIHQADLLRQQTLQQMHRILTTRQAARALLVISDYSSRLRALSSLWLARPRD* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01546 441 PANTHER TRANSCRIPTION FACTOR TGA9 96 440 - -
Eupl04g01546 441 CDD bZIP_HBP1b-like 155 207 - -
Eupl04g01546 441 SMART brlzneu 151 216 IPR004827 GO:0003700|GO:0006355
Eupl04g01546 441 MobiDBLite consensus disorder prediction 103 128 - -
Eupl04g01546 441 Coils Coil 174 201 - -
Eupl04g01546 441 SUPERFAMILY Leucine zipper domain 155 197 IPR046347 GO:0003700|GO:0006355
Eupl04g01546 441 ProSiteProfiles DOG1 domain profile. 222 438 IPR025422 GO:0006351|GO:0043565
Eupl04g01546 441 Pfam Seed dormancy control 239 313 IPR025422 GO:0006351|GO:0043565
Eupl04g01546 441 FunFam BZIP family transcription factor 154 203 - -
Eupl04g01546 441 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 153 197 IPR004827 GO:0003700|GO:0006355
Eupl04g01546 441 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 158 173 IPR004827 GO:0003700|GO:0006355
Eupl04g01546 441 Pfam Basic region leucine zipper 153 200 IPR004827 GO:0003700|GO:0006355
Eupl04g01546 441 Gene3D - 154 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01546 Eupl-Chr4 26099159 26112814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01546 19 441 bZIP Transcription Factor Family AT1G68640 64.720 9.86e-172 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl04g01546 DOG1 6.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01546 K14431 - nnu:104603005 676.781