Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01532 ATGGATTACACAGAGAAGATGATGAGATGTCAAGGTTACATGGAAGCATTAGAGGAAGAACGTCGTAAAATTCAAGTTTTCCATCGTGAGCTACCTCTATCTTTGGAGCTCATAACTCAAGCCATTGATAATTGTAGGCAGCAACTCGGGACTTCGATTGAATGCGAAGAACAGACATCGAGCGAAGGTCCTGTTTTAGAGGAGTTTATTCCTCTAAAACGGAGTTCATCTTCTGAAGAAGAACCATCACATAAGCCTAATGACAAGTGTCAAAAGGTGGACTGGTTGAGATCCGTTCAATTATGGAACCAAGACCCTAGTCCACAGCTAAAAGAGGATCTGCCTCGAGAAACATCTGTCATTGAGACGGAGAAAAACGGAGGTGGCCGCGGTGCATTTCACCCTTTTCATAGAGATAAAAGGGTGACAACAACAATAACAACAACAACAACAAATGTTGCGACGCCACCATCTTCAGCGGCACAGACGGCTGCGACAAGCTCGACCGCGGAGACAGCTAATGGTAATGGTGGTAATAGCAGACGAGAAGAGAAGGAGGGACAATCAAATAGGAAGGCAAGGCGAAGTTGGTCCCCAGAGCTACATCGAAGATTCTTACACGCACTTCAACAGCTTGGTGGATCTCATGCGGCGACGCCTAAGCAGATCAGGGAATTAATGAAGGTTGATGGGCTTACCAACGACGAAGTCAAAAGCCATTTACAGAAATATAGGTTACATACAAGAAGACCCAGTCCAGCAATTCACAATAATGGCAACCCTCAGCCCCCTCAGTTTGTTGTAGTAGGAGGCATATGGGTCCCACCGCCGGAATATGCCGCAATGGCGGCCACGACCGGTGAGGCGACCCGAGTTGCCACCAATGGAATCTATGCTCCAGTAGCTACTGCACCACCACAGCGGGCATTGGCGGCCTCGTGTTCTCAACAGCAACAACAGAAGCAATCACTGCAATCGCCAACAGGTCCATTGCACTCAGAAGGTAGGAGCAGCCGAGCCGAGCACAGCATTGGCGATGGCGATGCTCATTCTAGTTCTCCGACGACCTCTTCGTCCACCCACACCACGACGGCTTCCCCATCCTTCTAA 1110 0.4892 MDYTEKMMRCQGYMEALEEERRKIQVFHRELPLSLELITQAIDNCRQQLGTSIECEEQTSSEGPVLEEFIPLKRSSSSEEEPSHKPNDKCQKVDWLRSVQLWNQDPSPQLKEDLPRETSVIETEKNGGGRGAFHPFHRDKRVTTTITTTTTNVATPPSSAAQTAATSSTAETANGNGGNSRREEKEGQSNRKARRSWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPAIHNNGNPQPPQFVVVGGIWVPPPEYAAMAATTGEATRVATNGIYAPVATAPPQRALAASCSQQQQQKQSLQSPTGPLHSEGRSSRAEHSIGDGDAHSSSPTTSSSTHTTTASPSF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01532 369 SUPERFAMILY Homeodomain-like 190 250 IPR009057 -
Eupl04g01532 369 Gene3D - 191 249 - -
Eupl04g01532 369 MobiDBLite consensus disorder prediction 178 199 - -
Eupl04g01532 369 Pfam Myb-like DNA-binding domain 194 245 IPR001005 -
Eupl04g01532 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 352 IPR044787 GO:0003700|GO:0006355
Eupl04g01532 369 MobiDBLite consensus disorder prediction 348 369 - -
Eupl04g01532 369 MobiDBLite consensus disorder prediction 312 333 - -
Eupl04g01532 369 MobiDBLite consensus disorder prediction 142 177 - -
Eupl04g01532 369 NCBIfam myb-like DNA-binding domain, SHAQKYF class 192 247 IPR006447 GO:0003677
Eupl04g01532 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 249 IPR017930 -
Eupl04g01532 369 FunFam Myb family transcription factor 191 249 - -
Eupl04g01532 369 MobiDBLite consensus disorder prediction 312 369 - -
Eupl04g01532 369 MobiDBLite consensus disorder prediction 122 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01532 Eupl-Chr4 25775686 25778878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01532 1 315 G2-like Transcription Factor Family AT1G68670 49.432 1.09e-93 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl04g01532 Myb_DNA-binding 7.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01532 - - nnu:104603025 420.239