Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01517 ATGTCGAGCGAAGTACGATGGAGCAGAGACGAGGAGAAGGCCTTCGAGAATGCAATTGCGACGCATTGGATAGAGAACTCGAAGGACAGGTGGGAGAAGATTGCTTCCATGGTACCAAGTAAGACTGTAGCTGAATTGAAGCGGCACTATGAGCTACTAGTGGAGGACGTCGATGCAATTGAGGCCGGGAGAGTACCGATTCCAAGTTACGTTGGAGAGGAGACGACGAAGGAACACCATGTCTCTGCAGCTTTTGATCAACAGTACTCGTTCGGGCAAGGAATGAAAGGTGGGTCAAGATCCGATCAGGAGCGGCGGAAGGGGATCCCATGGACAGAAGAAGAGCATAGGTTATTCTTGCTCGGTCTAGACAAATTTGGCAAAGGCGATTGGAGAAGTATATCGAGGAACTTCGTCATCTCGAGGACTCCTACCCAGGTAGCAAGCCACGCACAAAAGTACTTCATCCGCTTGGGTTCTATGAATAGAGACAGGAGGAGGTCAAGCATCCATGACATTACGAGTGTGAACAATGGAGATGTCTCCTCGGCCCAAGGTCCTATTACAGGACAACAAACCAACACAGCCCACCACAACAGCAGCCCCCGTCGGACCATCCATGAAGCATCGTTCACCTCAACTGAATATGCCTGGTGTTGCAATGTATGGACCTCCAATGGGTCAGCCAGTTGCCGCCGCGCCAGGCCATATGGTATCAGCAGTAGGGACTCCAGTTATGATTCCTCCTGGACATCATCCCCATCTTCCCCCTTATGTTGTCCCAGTTACTTATCCAGTGGTACCACCACCAATGCACCAATAACAACCACTCACTTTCCAACATCTGAATTGAGGTTTCACTCCTGA 867 0.504 MSSEVRWSRDEEKAFENAIATHWIENSKDRWEKIASMVPSKTVAELKRHYELLVEDVDAIEAGRVPIPSYVGEETTKEHHVSAAFDQQYSFGQGMKGGSRSDQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLGSMNRDRRRSSIHDITSVNNGDVSSAQGPITGQQTNTAHHNSSPRRTIHEASFTSTEYAWCCNVWTSNGSASCRRARPYGISSRDSSYDSSWTSSPSSPLCCPSYLSSGTTTNAPITTTHFPTSELRFHS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01517 288 ProSiteProfiles Myb-like domain profile. 6 54 IPR001005 -
Eupl04g01517 288 FunFam transcription factor MYB1R1 109 160 - -
Eupl04g01517 288 Gene3D - 1 67 - -
Eupl04g01517 288 ProSiteProfiles SANT domain profile. 111 159 IPR017884 -
Eupl04g01517 288 CDD SANT 110 155 IPR001005 -
Eupl04g01517 288 MobiDBLite consensus disorder prediction 174 203 - -
Eupl04g01517 288 SUPERFAMILY Homeodomain-like 7 61 IPR009057 -
Eupl04g01517 288 PANTHER TRANSCRIPTION FACTOR KUA1 3 240 - -
Eupl04g01517 288 SMART sant 107 157 IPR001005 -
Eupl04g01517 288 SMART sant 3 56 IPR001005 -
Eupl04g01517 288 FunFam Transcription factor SRM1 1 67 - -
Eupl04g01517 288 Pfam Myb-like DNA-binding domain 110 155 IPR001005 -
Eupl04g01517 288 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Eupl04g01517 288 Gene3D - 109 161 - -
Eupl04g01517 288 CDD SANT 6 54 IPR001005 -
Eupl04g01517 288 ProSiteProfiles Myb-like domain profile. 103 155 IPR001005 -
Eupl04g01517 288 ProSiteProfiles SANT domain profile. 2 58 IPR017884 -
Eupl04g01517 288 SUPERFAMILY Homeodomain-like 105 159 IPR009057 -
Eupl04g01517 288 NCBIfam myb-like DNA-binding domain, SHAQKYF class 107 157 IPR006447 GO:0003677
Eupl04g01517 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 159 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01517 Eupl-Chr4 25386520 25388926 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl04g01517 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01517 - - nnu:104603045 293.508