Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01505 ATGTTTCTCTCCAACTACAGTGGCAACGCCGTTCCTTACACGGATCTAGCCATGTTCAATGACATCAGCCCTAATTCTAAACAGGATCCTTCCTCCTCCTTCTTCCAATTCTCTCCGACCTATATTGACAACGAGGACACGTTTTTCCCACACCACCAAGATCAGCTCTTTGTTGCTCACTTGCAACAACAGCAGCAGCTCTTGCCGGTAGACACTTCAAGCGAGACTCTACCTGTAAACGCAATCGGCACGATGATCCCACGAAAGAGATCTGCCAAGAAAGATCGACACAGCAAGATTGTTACGGCTCAAGGTCCGAGAGACCGGAGAATGAGGCTTTCCCTCCAAATTGCGCGCAGGTTCTTTAATCTCCAAGACATGCTAGGTTTCGACAAAGCTAGCAAAACGGTGGAATGGCTGCTAACCAAGTCGAAGGCAGCGATCAAAGAGCTCGGTAGGGAACCGTCGCAAACGAAGCATAGCAGTAGCGGTGGCGCCAAGAGTGTGTCTTCCACGTCTGAGTGCGAAGTGGTATCCGGTATTGACGAGACCGCCTACAATGAATATCATCAGCAAGGGATCATCTCCAGTGGGAAATCCTTGGAAGCTATTCCCAAGGAGAAAAAGATTAGACAGTCACGTAAAGCTACATTTCATCCTCTTGCAAGAGAGTCCAGGGCAGAAGCAAGAGCAAGAGCAAGGGAGAGAACAATGAAAAAGATGTGGAGTAGAAGACTAGACAAATCAAAACAATGTCCTCAAAAAAGCCCCCATAATCTGAACCAGTTGATGAGGTCTTCTAGTTCATTGGATACGGGAGATGAATCAGGTTCCCACAGTCACGACATGAAGTCTTCCTTGGAAGGGGTGGTTGAGATAGAAGAACGAAGCTCTCACTCTCCAGATGAGCACCATGGGCCTATGGAGAACATCAGTGAGGACTCTTTTGTGATCACCAGGAAGTTGAATCCATCGCCGATTTTCAATTATCACCATGATGTTGCGATATTACAAGGGGTAAGTTCCAACAACAACAACAACGTTCCTAATTTTCCAGAAAATTGGGACATCGATAACGCTAGAACACACTCTAGCTATTGTGTCATGACCAACATGCATCCATCAAGGGGTAATGTCCAAGAACGCATACCTAGCTCAATTTGCGTAACTACCCCAGATATTCGTTTTCCGTCTCAATTTGCAGATTCTCATTTCTATGGCAAACCTTGGGAACCTTGCAACAATCCAAGTCTATACTAA 1260 0.4619 MFLSNYSGNAVPYTDLAMFNDISPNSKQDPSSSFFQFSPTYIDNEDTFFPHHQDQLFVAHLQQQQQLLPVDTSSETLPVNAIGTMIPRKRSAKKDRHSKIVTAQGPRDRRMRLSLQIARRFFNLQDMLGFDKASKTVEWLLTKSKAAIKELGREPSQTKHSSSGGAKSVSSTSECEVVSGIDETAYNEYHQQGIISSGKSLEAIPKEKKIRQSRKATFHPLARESRAEARARARERTMKKMWSRRLDKSKQCPQKSPHNLNQLMRSSSSLDTGDESGSHSHDMKSSLEGVVEIEERSSHSPDEHHGPMENISEDSFVITRKLNPSPIFNYHHDVAILQGVSSNNNNNVPNFPENWDIDNARTHSSYCVMTNMHPSRGNVQERIPSSICVTTPDIRFPSQFADSHFYGKPWEPCNNPSLY* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01505 419 ProSiteProfiles TCP domain profile. 93 151 IPR017887 -
Eupl04g01505 419 MobiDBLite consensus disorder prediction 151 173 - -
Eupl04g01505 419 MobiDBLite consensus disorder prediction 205 286 - -
Eupl04g01505 419 MobiDBLite consensus disorder prediction 253 274 - -
Eupl04g01505 419 ProSiteProfiles R domain profile. 223 240 IPR017888 -
Eupl04g01505 419 Pfam TCP family transcription factor 92 243 IPR017887 -
Eupl04g01505 419 MobiDBLite consensus disorder prediction 217 252 - -
Eupl04g01505 419 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 80 362 IPR005333 GO:0003700
Eupl04g01505 419 MobiDBLite consensus disorder prediction 157 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01505 Eupl-Chr4 24843800 24845514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01505 88 167 TCP Transcription Factor Family AT1G68800 67.500 6.25e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl04g01505 TCP 1.1e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01505 - - mof:131146473 304.293