Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01476 ATGATGCCCCCCGAGCAAGAGATCGAAATTGCCGGTAGGTTGACTAACGTTCCGGTCGCTAATAGGTCGGAGAATGTTTCGGTGCATGCCGAACCACCCGGTTCTGCGAGCAACATGAATAATCCATGTTTGGATAATATTGATCGAATGCCCGAGCAATTCCAGGCATCCACAGGTCGATGTTCGGTACTTCACGAATCGTTACGCCCTGTGACACTCAAGTTCGAAGACGTGGCGTATGGTATAAAGCTGCGCACGACGGAAGGCAATTGCTTTGCATCACCTGATCCGAAGCCCGACCGAAACATACTCAATGGTGTGTCGGGGATTGTCCGACCGGGCGAAATTCTAGCAATGCTCGGTCCATCAGGTAGTGGCAAAACAACACTCCTAACTGCCCTTGCCGGTCGGCTACCGGGAAAGATATCGGGTAGCATAACATACAATGGGCAGCCCTTCTCTGGCTACATAAAGCGCAAGACTGGGTTTGTAACACAAGATGATGTGCTTTACCCTCACCTCACTGTACTTGAGACCCTAACGTATGCCGCTCTGTTAAGGTTACCGAGCAAATTAACCAAGGAAGAGAAAATTGAGCAAGCCGAATTAGTAATCATGGAACTTGGGTTAACTAGATGTCGTAACGGTATAGTTGGTGGGCCCCTATTGCGTGGTTTGTCGGGCGGTGAGCGCAAGCGGGTGAGTATCGGGCAGGAAATGCTAGTGAACCCTAGTCTTTTGTTGCTAGATGAGCCAACATCAGGGCTTGATTCGACTACGGCTCAACGTATTATTGCGACATTGCAAGGGCTAGCAAGAGGTGGCAGGACAGTGGTGACAACAATACATCAGCCGTCGAGTCGGTTGTATCGGATGTTTGATAAGGTTTTGGTGTTATCAGACGGATACCCAATTTACAGCGGTAGTGCGTGTCGGGCATTGGAGTATTTCGGATCTATCGGTTATGTACCAGGGGTTAATTTCATCAACCCAGCTGATTTTCTGCTCGATCTTGCTAATGGTGTGGGGCCAGATATGAAGCAAGGTGATCATCAGCAGGAGCATCATGTTCGATCGGAACATGACGATCAAAATTCGACCAAACAGTCCCTAATATCTTCTTACAAAAAAAATCTACATCTTGTCTTAAAAGCGGAGATTCGCCAAAATTGCAGGGACCCAGATTCTTCTGTACCACGACCATCACTTTGCAGGAGTTCGGAGAAGCAATGGACGACTAGCTGGTGGGAGCAATTCAAAGTGTTGTTGGAAAGAGGTCTAAAAGAAAGGAAACATGAATCCTATTCCGGGTTAAGGATTTTCCAGGTCATGTCGGTTTCGCTTCTTGCCGGCCTCCTGTGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTGGGCCTCCTCTTCTTCTTCGCCATATTCTGGGGCTTCTTTCCTATGTTCAATGCCATATTCGCATTCCCTCAAGAGTGGCCGATGCTAAACAAGGAATGTTCGTCGGGCATGTACCGTCTCTCCTCCTACTACTTTGCGCGAATGGCCGGGGACTTGCCGATGGAGCTCGTACTCCCAACCATCTTTGTAGCTGTCTCCTATTGGATGGGAGGTCTCAAGCCTTCACCCATCAACTTTATACTAACCCTCTTGATCATCCTTTTCAATGTCCTAGTCTCCCAAGGACTAGGCCTTGCCCTTGGTGCAATTCTCATGGAAGTGAAACAGGCTACGACCTTAGCTTCAGTGACCATGCTCGTATTCCTACTAGCTGGTGGGTACTACATTCAACACATTCCTCCTTTCATAGCTTGGTTGAAGTACATTTCCTTTAGCCATTACTGTTACAAGCTTCTTGTGGGAGTCCAATACACTGATGATGACTACTATGACTGTGGGTTCAGTTCCCATTGCAAGGTTTTGGAGTTCCCTGCTATCAAGCATCTGGGTCTCAATAACAAGGGATTTGATGTGTTTGCTTTGGTCCTAATGTTGGTGGGATATAGGATCATGGCTTATGTAGCCCTGAAGCTTGCCCAACCTCATTGA 2046 0.4795 MMPPEQEIEIAGRLTNVPVANRSENVSVHAEPPGSASNMNNPCLDNIDRMPEQFQASTGRCSVLHESLRPVTLKFEDVAYGIKLRTTEGNCFASPDPKPDRNILNGVSGIVRPGEILAMLGPSGSGKTTLLTALAGRLPGKISGSITYNGQPFSGYIKRKTGFVTQDDVLYPHLTVLETLTYAALLRLPSKLTKEEKIEQAELVIMELGLTRCRNGIVGGPLLRGLSGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIIATLQGLARGGRTVVTTIHQPSSRLYRMFDKVLVLSDGYPIYSGSACRALEYFGSIGYVPGVNFINPADFLLDLANGVGPDMKQGDHQQEHHVRSEHDDQNSTKQSLISSYKKNLHLVLKAEIRQNCRDPDSSVPRPSLCRSSEKQWTTSWWEQFKVLLERGLKERKHESYSGLRIFQVMSVSLLAGLLWWHSDPSHIQDQVGLLFFFAIFWGFFPMFNAIFAFPQEWPMLNKECSSGMYRLSSYYFARMAGDLPMELVLPTIFVAVSYWMGGLKPSPINFILTLLIILFNVLVSQGLGLALGAILMEVKQATTLASVTMLVFLLAGGYYIQHIPPFIAWLKYISFSHYCYKLLVGVQYTDDDYYDCGFSSHCKVLEFPAIKHLGLNNKGFDVFALVLMLVGYRIMAYVALKLAQPH* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01476 681 SMART AAA_5 113 304 IPR003593 GO:0016887
Eupl04g01476 681 MobiDBLite consensus disorder prediction 348 365 - -
Eupl04g01476 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 326 IPR003439 GO:0005524
Eupl04g01476 681 Pfam ABC-2 type transporter 283 345 IPR043926 GO:0140359
Eupl04g01476 681 Pfam ABC transporter 104 254 IPR003439 GO:0005524
Eupl04g01476 681 Gene3D - 91 319 IPR027417 -
Eupl04g01476 681 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Eupl04g01476 681 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Eupl04g01476 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 671 - -
Eupl04g01476 681 MobiDBLite consensus disorder prediction 345 367 - -
Eupl04g01476 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 321 IPR027417 -
Eupl04g01476 681 FunFam ABC transporter G family member 22 91 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01476 Eupl-Chr4 24143263 24148361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01476 92 309 Calmodulin-binding Proteins AT2G36910 28.571 1.18e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01476 K05681 - csin:114309794 1045.42