Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01462 ATGAGTGGAGGTAGAAGAAAGAAGCTGCAATTAAGCAAAATCTATGCCTTCTCCTGTGGGAAAGCGTCTTTCAAGGATGACCACTCGCAGATTGGCGGTCCAGGCTTCTCAAGGGTAGTCTTCTGCAATGAACCATATTGCTTTGACGCCGCAGTTCTCAGTTACGGAGGGAATTATGTTAGAACTACAAAGTATACGCTTGCCACGTTCCTCCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTCGCCAACATGTACTTCCTCGTTGCTTGCTGCTTGTCGTTCACACCGCTCGCTCCTTACAGTGCTGTCAGCGCTGTTCTCCCTCTTGTTGTCGTGATTGGGGCGACCATGATCAAAGAGGCTGTTGAAGATTGGAGGCGGAAAAAGCAGGATATTGAGATGAACAATCGGAAGGTTAAAGTTCATCATCGTGATGGCATTTTCTATTATACCGAGTGGAAGAATCTAAGAGTTGGAGATATAGTGAAGGTGGAGAAAGATGACTTCTTTCCAGCTGACCTCCTCTTGCTTTCATCCAGTTATGACGATGCAGTCTGCTATGTCGAGACCATGAACCTTGATGGGGAGACAAATTTGAAGCTAAAACAAGCATTGGAGGTGACTTCAGGCTTACATGAGGACTCCAGCTTCCAGAATTTCAAGGCTGTGGTTAAATGTGAAGATCCAAATGCAAACCTGTACTCTTTTGTTGGAAGTATGGATTTCGAAGAGCAACAGTACCCCCTTATGCCTCAACAACTTCTCCTTAGGGACTCAAAGCTCCGGAATACACAGTACATCTATGGGGCTGTTATTTTCACAGGCCATGATACAAAAGTTATTCAAAATTCAACAGACCCACCATCTAAGAGAAGCAAAGTTGAGAGGAAGATGGATAAAATTATCTACTTGTTGTTTTGCATCTTGGTTTTGATGTCTTTTGTTGGATCGATTATCTTTGGGATTGCAACTAGGGAGGACCTAGAAAATGGCAGGATGAAGCGATGGTATCTTAGACCGGACGATTCCACGGTTTTCTTCGATCCCAAAAGAGCACCCATCGCTGCGATTCTGCATTTTCTTACAGCCCTGATATTGTATGGCTACTTGATTCCTATCTCCTTGTATGTATCCATAGAAATTGTCAAAGTTCTGCAGAGCATCTTTATTAATCAAGACCTGCTCATGTACTATGAGGAAGCCGACAAACCCGCGCATGCCCGCACTTCGAACTTGAATGAGGAGCTTGGCCAAGTCGACACGATACTTTCTGATAAGACGGGAACCCTGACCTGCAACTCCATGGAATTCATCAAGTGTTCTGTGGCTGGGACGGCTTATGGCCGTGGCGTCACAGAGGTTGAGAGGGCGATGGCTAGAAGAAAGGGATCACCATTAGTTCATGAAGTGGTAGATAGTGTGGGCCATGTAGAGGATCCTGAAGATGGAAAACCAACCATTAAGGGATTTAATTTTAAGGATGAAAGAATCATGAATGGGAAATGGGTTAACGAGCCTCGCTCAGATGTCATTCAAAAGTTCTTTCGCTTATTGGCGATTTGCCATTCAGCCATACCAGAAGTGGAAGAAGAGACGGGGAAAATTTCTTATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCAAGAGAGCTTGGCTTTGAATTTTACAGAAGGACCCAAACAAGCATCTCACTGCATGAGTTTGATCCTGTGTCTGGCATGAAAGTTGAAAGGTCATATAAGCTTTTGAATATGTTAGAGTTTAATAGCTCAAGAAGGCGGATGTCTGTAATAGTAAGAAATGAGGAGGGCAAGTTATTACTACTTTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCAAAGGATGGGAGGGAGTTTGAAGAGCACACTAGGGACCACATGAACGAGTATGCGGATGCCGGTCTGAGGACCTTGGTGCTGGCATATCGTGAACTCAATGAAGAAGAATACAAAGAGTTTAATGAGGAATTCACTGAGGCAAAGAACTCTGTCAGTGCAGATCGGGAAGAAATGGTTGATGAAGTGGCAGAAAAGATAGAGAAGGATTTGATTCTTCTCGGTGCCACTGCTGTTGAGGACAAACTCCAAAATGGGGTCCCCGAATGCATTGACAAGCTCGCACAAGCTGGACTAAAGATATGGGTTTTGACTGGAGATAAGATGGAGACTGCCATAAATATTGGTTTCGCGTGTAGTTTGCTTAGACAAGGAATGAAGCAGATAATTATCAACTTGGAGACACCAGGAATTAAAGCCTTGGAGAAAGCAGGGGACAAGTCTGCAATATTGAAGGCGTCAAAGGAAAGTGTTCTCCATCAGATAAGTGAGGGGAAGGCACTGATTTCTGCGTTGAATGTTAGCTCTGATGCATTTGCTTTGATAATCGATGGGAAGTCGCTTACTTATGCTCTAGAGGATGATATGAAGAACATGTTTCTAGAGTTAGCAATTGGCTGTGCATCTGTTATTTGCTGCCGCTCATCACCAAAACAGAAAGCACTTGTTACAAGACTGGTTAAAACTGGAACAGGTAAGACAACATTAGCAATTGGTGATGGGGCCAATGATGTGGGAATGCTTCAAGAAGCAGATATTGGAGTTGGTATCAGTGGAGTTGAAGGAATGCAGGCAGTCATGTCAAGTGACATTGCAATTGCTCAGTTCCAATTTTTGGAGCGTTTGCTACTTGTGCATGGACATTGGTGTTACAGAAGGATCTCGTCAATGATATGCTACTTCTTCTACAAGAATATAGCATTTGGTTTCACTCTCTTCTTGTTCGAGGCGTATGCATCATTCTCTGGGCAGACTGCTTATAATGATTGGTTCATGTCATTTTATAATGTCTTCTTCACATCACTTCCGGTGCTTGCTCTAGGGGTGTTTGACCAAGATGTCTCTGCACGGTTTTGTCTCAAGTTCCCCCTACTTTATCAAGAAGGTGTGCAGAATGTTCTCTTCAGTTGGCTTCGGATACTCGGCTGGATGTTAAATGGGGTTTGCAGTGCCATCATCATATTCTTCTTCTGCACTAGTGCATTGGAACACCAGGCCTTCCGTAAGGGCGGGGAGGTTGTTGGGTTGGAGATTCTTGGAGCTACCATGTACACATGCGTCGTCTGGGTTGTGAACTGCCAAATGGCGCTCTCAGTTAGTTACTTCACCCTGATACAACATCTCTTCATCTGGGGTGGCATCTTGGTATGGTATCTTTTCCTCTTGGCCTATGGTGCCATGTCCCCAACTATATCCACAACTGCCTACAAGGTCTTCATTGAAGCCTGTGCTCCAGCCCCTTCTTACTGGCTCGTCACGCTCGTCGTGGTAATCTCCACCCTCATCCCATACTTTTTGTACTCAGCCATCCGGTTGCGATTCTTCCCCATGTATCATGGGATGATACAGTGGATAAGACTGGAGGGGCAATGTGAAGACCCTGAGTATTGCCAGATGGTTCGGCAGAGATCCATTAGGCCCACAACAGTAGGTTTTACGGCAAGGTTGGAAGCAAAATCTAATCGCTTAAAAGAGAAGCGTCATCAAAACACATAA 3591 0.4467 MSGGRRKKLQLSKIYAFSCGKASFKDDHSQIGGPGFSRVVFCNEPYCFDAAVLSYGGNYVRTTKYTLATFLPKSLFEQFRRVANMYFLVACCLSFTPLAPYSAVSAVLPLVVVIGATMIKEAVEDWRRKKQDIEMNNRKVKVHHRDGIFYYTEWKNLRVGDIVKVEKDDFFPADLLLLSSSYDDAVCYVETMNLDGETNLKLKQALEVTSGLHEDSSFQNFKAVVKCEDPNANLYSFVGSMDFEEQQYPLMPQQLLLRDSKLRNTQYIYGAVIFTGHDTKVIQNSTDPPSKRSKVERKMDKIIYLLFCILVLMSFVGSIIFGIATREDLENGRMKRWYLRPDDSTVFFDPKRAPIAAILHFLTALILYGYLIPISLYVSIEIVKVLQSIFINQDLLMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMARRKGSPLVHEVVDSVGHVEDPEDGKPTIKGFNFKDERIMNGKWVNEPRSDVIQKFFRLLAICHSAIPEVEEETGKISYEAESPDEAAFVIAARELGFEFYRRTQTSISLHEFDPVSGMKVERSYKLLNMLEFNSSRRRMSVIVRNEEGKLLLLCKGADSVMFERLAKDGREFEEHTRDHMNEYADAGLRTLVLAYRELNEEEYKEFNEEFTEAKNSVSADREEMVDEVAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIIINLETPGIKALEKAGDKSAILKASKESVLHQISEGKALISALNVSSDAFALIIDGKSLTYALEDDMKNMFLELAIGCASVICCRSSPKQKALVTRLVKTGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFQFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFLFEAYASFSGQTAYNDWFMSFYNVFFTSLPVLALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWLRILGWMLNGVCSAIIIFFFCTSALEHQAFRKGGEVVGLEILGATMYTCVVWVVNCQMALSVSYFTLIQHLFIWGGILVWYLFLLAYGAMSPTISTTAYKVFIEACAPAPSYWLVTLVVVISTLIPYFLYSAIRLRFFPMYHGMIQWIRLEGQCEDPEYCQMVRQRSIRPTTVGFTARLEAKSNRLKEKRHQNT* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01462 1196 CDD P-type_ATPase_APLT_Dnf-like 57 1023 - -
Eupl04g01462 1196 Coils Coil 656 676 - -
Eupl04g01462 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Eupl04g01462 1196 Gene3D - 700 903 IPR023214 -
Eupl04g01462 1196 SFLD C1.7: P-type atpase like 406 914 - -
Eupl04g01462 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Eupl04g01462 1196 SUPERFAMILY HAD-like 412 908 IPR036412 -
Eupl04g01462 1196 FunFam Phospholipid-transporting ATPase 541 699 - -
Eupl04g01462 1196 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Eupl04g01462 1196 Gene3D - 116 286 - -
Eupl04g01462 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 34 1151 - -
Eupl04g01462 1196 Pfam Phospholipid-translocating ATPase N-terminal 52 106 IPR032631 -
Eupl04g01462 1196 Pfam Cation transport ATPase (P-type) 522 625 - -
Eupl04g01462 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 701 IPR023299 GO:0000166
Eupl04g01462 1196 PRINTS P-type cation-transporting ATPase superfamily signature 761 771 - -
Eupl04g01462 1196 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Eupl04g01462 1196 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Eupl04g01462 1196 NCBIfam phospholipid-translocating P-type ATPase 55 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Eupl04g01462 1196 SFLD p-type atpase 406 914 IPR044492 -
Eupl04g01462 1196 FunFam Phospholipid-transporting ATPase 116 286 - -
Eupl04g01462 1196 FunFam Phospholipid-transporting ATPase 699 903 - -
Eupl04g01462 1196 Gene3D - 566 699 IPR023299 GO:0000166
Eupl04g01462 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1141 IPR023298 -
Eupl04g01462 1196 NCBIfam HAD-IC family P-type ATPase 829 946 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01462 Eupl-Chr4 23767825 23775733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01462 1 1189 Primary Pumps ATPases AT1G68710 73.895 0.0 1897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01462 K01530 - msin:131234384 2023.05