Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01455 ATGGCGTCTGCAGCACCTTCTCCAAGTTCTTCTCCTTCCACAGTCCCCCCCGCGGCTTCCACTACTAGTCCACCACCACCTTCAACTACCTCCCCTTCTCCATCAGACCCTTCAACAACTTCACCACCTCCCACACCTTCTCAGCCACCACCACCTTCTATTAGTCCCCCTCCTCCTTCAGACTCTTCAACACCTTCACCACCTCCTACAGTTTCTCAGTCCAATGTGACTTCGGATCCACCGGCCCCTACAATCCCTTCTACTCCTTCATCCCCACCACCTCAATCTCCTCCTCCCACTGTTCCAGCTGCTCCTCCTCCAGTACTTGTATCGCCTCCTGCTCCACCACCACCTCCTCTTCCCACTCCAGCACCACTGACTTCTCCGCCGGTACTCACACCGCCACAATCTCCACCTCGTGCCCCTCCTCCAGATGTGCCTTCACCACCTCCACCTGCATTATCACCTCCACCACCCGCCACTGGAAATTCCCCTCCCCCAGTTTCCCATTCACCTCCTCCAGCATTATCACCTCCACCACCCGCCACTGGAAATTCCCCTCCCCCAGTTTCCCATTCACCTCCTCCAGCATTATCACCTCCACCACCCGCAGTTTCCCCGTCACCTCCTCCTCCTCAAGCAGTCTCACCACCTTCTCCACCTTCATCAGCTGTCTCTCCTCCTCCTCCCGCTAATTCTGCACCCCCATTGCCTTCCAATTCTCCTCCGCCACCATCAGCAAATCCACCTAAAAATTCACCTCCACCTCCATCTCCTAGGCTTACACCTCCTGCTCCCTCTGGTTCTCAACCAGTATCTCCACCTTCCCCAAATTCCCCACCCAGATCATCACCACCACCCAGAAATCAATCACAGCCCATGCCTCCTCCTCCTCCTTCACCCCCTTCAGGCACTTCTGCCTCGTCTCCTCCACCTCCTCAAAGTAATTCCTCTTCTAGTGGATCTCCCTCATTTCCAACCCCACCCTTTACTGCATTCCCACCAGAGGCGCCATCGAATCCTAGTCCAAGTGTACCGGGAAATGCCAACTCCACAGGTGGTGGGGGGATTCAAACAGGGGGCCTTGTGGCAATCGGTATTGTAGCAGGCTTCGTAGTGCTTAGTCTCATAGGAATGACTGTGTGGTGTGCGAAGAAACAAAAGAAAAAGGCGGCTGGATACAATGGTGGCTATGTTATGCCTTCCCCACTTGGTTCTTCCCAGAAGTCAGATTCATTTTACATAAAGAGCAATTCTTCGGCTCCTTTAGTAAGAGGTGGCTCTAGCAGTGATTTTGTATATTCACCATCAGAGCCAGGTGGGTTAGGAAATTCGAGGTTGTGGTTCACATACAAAGAACTAATAGATGCCACAAATGGATTTTCAGCAAAGAATCTTTTGGGTGAAGGTGGATTTGGTTGTGTATACAAAGGATTTCTAGCAGATGGAAGAGAGGTGGCTGTAAAACAGCTCAAGATTGGTGGCGCTCAGGGAGAGCGTGAATTCAGAGCTGAAGTCGAGATTATTAGCCGTGTACACCATCGCCATTTGGTTTCACTAGTCGGGTACTGCATATCTGAGCATCAAAGATTGCTTGTCTATGATTATGTCCCAAACAATACCCTATATTACCATCTTCATGGGGAAGGTAGGCCAGTTATGGATTGGGCAACCCGGGTTAAGGTTGCTTCTGGTGCTGCTCGTGGAATGGCTTACCTGCATGAAGACTGCCATCCTCGGATTATTCACAGGGATATCAAGTCATCAAACATTCTTTTAGACAACAACTTTGAAGCTCGGGTTTCAGATTTTGGGCTCGCAAAGTTAGCTCTCGATGCTCACACACATGTAACCACACGTGTGATGGGAACCTTTGGATACATGGCTCCAGAATACGCATCAAGTGGCAAGTTGACTGAAAAGTCTGATGTGTACTCTTTCGGAGTTGTGCTTTTAGAACTAATTACTGGTCGCAAGCCTGTGGATGCATCTCAACCCTTGGGAGATGAGAGTCTGGTTGAATGGGCTCGACCATTGCTTAGTCATGCACTTGAGAATGAAGAATTTGAAGGTGTGGTAGATCCAAGGCTCGAAAAGAACTACATAGAAAGTGAGATGTTCCGGATGATTGAAGCAGCTGCAGCATGCGTGCGTCATTCTTCTGTGAAGAGACCTCGTATGGGACAGGTGGTCAGAGCTTTAGACTGTATTGGTGACTCTTCAGATCTAAACAACGGAATGAGACCGGGGCAAAGTGAAGTCTTCAATTCTGCACAACAATCTGCAGAAATCAGATTGTTTCGAAGGATGGCATTTGGTAGTCAAGACTACAGTACCGATTTTTTCAGTCAAGAGAGCAGGAGTTGA 2367 0.4994 MASAAPSPSSSPSTVPPAASTTSPPPPSTTSPSPSDPSTTSPPPTPSQPPPPSISPPPPSDSSTPSPPPTVSQSNVTSDPPAPTIPSTPSSPPPQSPPPTVPAAPPPVLVSPPAPPPPPLPTPAPLTSPPVLTPPQSPPRAPPPDVPSPPPPALSPPPPATGNSPPPVSHSPPPALSPPPPATGNSPPPVSHSPPPALSPPPPAVSPSPPPPQAVSPPSPPSSAVSPPPPANSAPPLPSNSPPPPSANPPKNSPPPPSPRLTPPAPSGSQPVSPPSPNSPPRSSPPPRNQSQPMPPPPPSPPSGTSASSPPPPQSNSSSSGSPSFPTPPFTAFPPEAPSNPSPSVPGNANSTGGGGIQTGGLVAIGIVAGFVVLSLIGMTVWCAKKQKKKAAGYNGGYVMPSPLGSSQKSDSFYIKSNSSAPLVRGGSSSDFVYSPSEPGGLGNSRLWFTYKELIDATNGFSAKNLLGEGGFGCVYKGFLADGREVAVKQLKIGGAQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLYYHLHGEGRPVMDWATRVKVASGAARGMAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLAKLALDAHTHVTTRVMGTFGYMAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHALENEEFEGVVDPRLEKNYIESEMFRMIEAAAACVRHSSVKRPRMGQVVRALDCIGDSSDLNNGMRPGQSEVFNSAQQSAEIRLFRRMAFGSQDYSTDFFSQESRS* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01455 788 SUPERFAMILY Protein kinase-like (PK-like) 442 734 IPR011009 -
Eupl04g01455 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Eupl04g01455 788 CDD STKc_IRAK 467 735 - -
Eupl04g01455 788 FunFam Proline-rich receptor-like protein kinase PERK8 433 536 - -
Eupl04g01455 788 MobiDBLite consensus disorder prediction 82 309 - -
Eupl04g01455 788 Gene3D Transferase(Phosphotransferase) domain 1 537 757 - -
Eupl04g01455 788 SMART serkin_6 461 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01455 788 ProSiteProfiles Protein kinase domain profile. 461 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01455 788 MobiDBLite consensus disorder prediction 327 342 - -
Eupl04g01455 788 FunFam proline-rich receptor-like protein kinase PERK8 537 749 - -
Eupl04g01455 788 MobiDBLite consensus disorder prediction 310 326 - -
Eupl04g01455 788 MobiDBLite consensus disorder prediction 10 66 - -
Eupl04g01455 788 Pfam Protein tyrosine and serine/threonine kinase 464 733 IPR001245 GO:0004672|GO:0006468
Eupl04g01455 788 MobiDBLite consensus disorder prediction 1 353 - -
Eupl04g01455 788 MobiDBLite consensus disorder prediction 67 81 - -
Eupl04g01455 788 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 370 770 IPR047117 -
Eupl04g01455 788 PRINTS Pistil-specific extensin-like signature 147 165 IPR003882 -
Eupl04g01455 788 PRINTS Pistil-specific extensin-like signature 112 135 IPR003882 -
Eupl04g01455 788 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Eupl04g01455 788 Gene3D Phosphorylase Kinase; domain 1 439 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01455 Eupl-Chr4 23705439 23715660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01455 350 730 Trihelix Transcription Factor Family AT1G68690 70.341 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Eupl04g01455 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01455 - - nnu:104603097 753.436