Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01452 ATGCAAAGAATACTGAAAATATTTGTTTCCTTTTCCCATGCTACAGGCTTGCTTCGATGCGGGAAGAGTTGCCGTTTGAGGTGGACCAACTATTTGAGACCAGACATCAAGCGCGGCCAGTTCTCATTTGAAGAGGAGAACACCATAATAAGCTTGCATTCAGCTTTGGGGAACAAGTGGTCGGCTATAGCGGCTCGCCTGCCTGGCCGGACCGATAACGAGATAAAGAACCACTGGAACACCCATTTAAAGAAAAGGCTGATGAGTATGGGAATCGATCCAATAACCCACGAGGCCATCCTCCGACCACCACAAATGGAGGCCAATAACTTTTCTTTCACAACTCTCCTCAATCAGGTGACAGGCCAAGATCACATCACGTGCACACTACATCATATCGAACCAGATTATGGATCCAATGGTCATGAGTACATGAGAGAACCAATCTTTGAACCTCTTGAGATCAAGAAGCTTATAGGAAAGGATGAAGGTCGGGCCACTGTTAGTGGAGGAAGAAATGAGTACTGGGGTAACATTTCAGATGGAGTTGAAGCCTTCATGAACCCAGCAACAAACATCTTTAAGTTCTAA 591 0.4552 MQRILKIFVSFSHATGLLRCGKSCRLRWTNYLRPDIKRGQFSFEEENTIISLHSALGNKWSAIAARLPGRTDNEIKNHWNTHLKKRLMSMGIDPITHEAILRPPQMEANNFSFTTLLNQVTGQDHITCTLHHIEPDYGSNGHEYMREPIFEPLEIKKLIGKDEGRATVSGGRNEYWGNISDGVEAFMNPATNIFKF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01452 196 Gene3D - 39 99 - -
Eupl04g01452 196 FunFam MYB transcription factor 39 100 - -
Eupl04g01452 196 Gene3D - 6 37 - -
Eupl04g01452 196 CDD SANT 41 83 IPR001005 -
Eupl04g01452 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 87 IPR017930 -
Eupl04g01452 196 SMART sant 37 85 IPR001005 -
Eupl04g01452 196 ProSiteProfiles Myb-like domain profile. 33 83 IPR001005 -
Eupl04g01452 196 Pfam Myb-like DNA-binding domain 38 83 IPR001005 -
Eupl04g01452 196 SUPERFAMILY Homeodomain-like 19 90 IPR009057 -
Eupl04g01452 196 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 13 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01452 Eupl-Chr4 23651175 23655652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01452 16 97 MYB Transcription Factor Family AT4G05100 85.366 1.03e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl04g01452 Myb_DNA-binding 7.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01452 K09422 - atr:18434087 171.4