Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01419 ATGGCTCAAGATACTTCTGGTCCTGATTCACCTCATCGAAGGGCAGGCCTCTTACGAGATCAGGTTCATTTGGTAAAGCGAAAGGACTCTGATCGCTACGAGATTGCCCCAATCCAAGATCCATTGTCATTTGAGAAGGGTTTCTTTATAGTAATCCGTGCATGCCAGTTGTTGGCCCAAAAGAATGATGGGCTAATATTGGTAGGGGTAGCGGGTCCCTCAGGGGCTGGGAAGACTGTATTTACTGAGAAAGTACTCAATTTTATGCCCAGCATTGCCGTCATATCAATGGACAACTACAATGATTCCAGTCGTATTATTGATGGCAATTTTGATGACCCTCGCTTGACGGACTATGATACATTGCTCGAGAATATCCATGGCCTAAAAGAGGGGAAGCCTGTTCAGGTGCCTATATATGATTTCAAGTCTAGCACTCGCACGGGATACAGAACAATTGAAGTGCCGAGCTCTCGGATTGTGATTATCGAAGGCATCTATGCTTTGAGTGAAAGATTGCGACCTTTTTTAGATCTTCGAGTATCAGTCACAGGTGGTGTTCACTTCGACCTTGTGAAACGAGTTTTACGGGACATACAACGTGCTGGCCAAGAACCAGAAGAAATAATCCAGCAAATCTCTGAAACGGTATATCCGATGTACAAGGCTTTTATTGAGCCAGATCTACGAACAGCACATATAAAAATTATCAACAAATTCAATCCATTCACGGGATTCCAGAACCCCACTTATATTTTAAAGTCTCCGAGGACTCTGACGGCAGATCAAATCAAGGCCGTTATTTCTGAAGAACATACAGAAACTATGGAGGAGACATATGATATATATCTTCTACCACCAGGTGAAGATCTTGAAGCTTGCCAATCTTATCTACGGATGCGGAACAGAGATGGAAAATACAATCTTATGTTTGAGGAATGGGTTACAGATAGTCCATTCATCATATCACCAAGAATCACTTTTGAAGTCAGTGTGCGCCTTCTCGGCGGGCTGATGGCCTTGGGGTACACCATAGCAGCCATACTTAAAAGAAGCAGCCATGTTTTCTCTGATGAGAGGATCTGTGTGAAAATTGATAGGTTAGAACAACTGAATCGCCACTATGTTCAGGTGCAAGGTAGAGACCGTTTATATGTGAAATCTGTAGCAGAGCAATTGGGTTTGGATGGTTTATATGTTCCTCGCACTTACATAGAACAGATTCAGCTAGAAAAGCTTGTAAATGAAGTTATGACATTGCCAGATGATCTGAAGACAAAGCTCAGCATAGATGATGATCTGGTTTCTTCAAGTCCTAAAGAAGCACTTTCTCGAGCCTCAGCAGATATGAGAAATAAGCATATTAAGAGCGGTATGTCACACTCATATTCGACTCATGGTGACAAGAATCTATCCAAGCTGACCAGACTTGCTGTCAACAATAGGTCTGATGGAAGAAACCCAGAATCACCCAAAATGCTCGCGAACGAGGGAGTCATTACTCAACTTTCGGAACAAATTTCCACACTGAATGAGAGGATGGATGAGTTTACATCTCGGATCGAAGAGCTGAATTCCAAGTTCACCGTCAAGAAAATTTCTGCCAGCCAACAAAACTTGGCTCTGCCAGCTGAAGCCTGCAATGGCTCTGCACCCACATCTTTCTTTGTATCTAGTTTGGGCAATGGTTCCCTTTTACCAAATTCCTCGTCTTCTCCCCAGCTGGCAAAGGAATCTCCGTTAATGGAAGAGATCACAGTCATTGCACGAGGACAACGTCAACTGATTCATCAATTAGATAATCTCAGCAATTTTCTCCATGAGAGCTTGGGTGAGCGGTCTTTTCAAGGAAGAACAGATAGGACAGATAGGAGAAGCAAAATGGCCAATTTTGATTTCGTTGGAGCTCCTCTTGTTCTCACATTAGTGATTGGTGGTGTGGGAATCTGCTTGTTTAAGGGTCTATCATCCCGAAATTGA 1980 0.4308 MAQDTSGPDSPHRRAGLLRDQVHLVKRKDSDRYEIAPIQDPLSFEKGFFIVIRACQLLAQKNDGLILVGVAGPSGAGKTVFTEKVLNFMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLENIHGLKEGKPVQVPIYDFKSSTRTGYRTIEVPSSRIVIIEGIYALSERLRPFLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIQQISETVYPMYKAFIEPDLRTAHIKIINKFNPFTGFQNPTYILKSPRTLTADQIKAVISEEHTETMEETYDIYLLPPGEDLEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFSDERICVKIDRLEQLNRHYVQVQGRDRLYVKSVAEQLGLDGLYVPRTYIEQIQLEKLVNEVMTLPDDLKTKLSIDDDLVSSSPKEALSRASADMRNKHIKSGMSHSYSTHGDKNLSKLTRLAVNNRSDGRNPESPKMLANEGVITQLSEQISTLNERMDEFTSRIEELNSKFTVKKISASQQNLALPAEACNGSAPTSFFVSSLGNGSLLPNSSSSPQLAKESPLMEEITVIARGQRQLIHQLDNLSNFLHESLGERSFQGRTDRTDRRSKMANFDFVGAPLVLTLVIGGVGICLFKGLSSRN* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01419 659 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Eupl04g01419 659 PRINTS Uridine kinase signature 65 82 - -
Eupl04g01419 659 PRINTS Uridine kinase signature 224 237 - -
Eupl04g01419 659 PRINTS Uridine kinase signature 132 147 - -
Eupl04g01419 659 PRINTS Uridine kinase signature 188 198 - -
Eupl04g01419 659 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Eupl04g01419 659 SUPERFAMILY CYTH-like phosphatases 260 407 IPR033469 -
Eupl04g01419 659 Coils Coil 500 527 - -
Eupl04g01419 659 Pfam CYTH domain 251 396 IPR023577 -
Eupl04g01419 659 CDD UMPK_like 67 239 - -
Eupl04g01419 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 236 IPR027417 -
Eupl04g01419 659 Gene3D - 257 413 - -
Eupl04g01419 659 Gene3D - 66 245 IPR027417 -
Eupl04g01419 659 PANTHER URIDINE KINASE 18 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01419 Eupl-Chr4 22797814 22812746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01419 66 365 PRT Gene Family AT5G40870 23.397 1.37e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01419 K00876 - nnu:104597814 1085.48