Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01418 ATGGGAGCAGCAGAGGAAGCGGCGTCAGTTGGTGTTGGCTTTACTCCGGAAGATGAGGGAATTGAAGTAGAAGCTGAGGAAGGAGAGATCTTGGAGCCTTTGGCCACTTCGATCGTCCCTCAACAACCTCTGCACCCGTTGGAACACTCATGGACCTTCTGGTTCGACAACCCCTTCGCCAAATCCAAGCAGGCCGCCTGGGGCAGTTCCATTCGTCCCATCCACACTTTCGCCACCGTCGAGGAATTCTGGAGCCTATACAATAATATAAATCATCCAAGCAAGTTAGCCATTGGAGCGGATTTCAATTGTTTCAAGTACCAAATTGAGCCAAAATGGGAGGACCCTGTTTGTGCTACTGGGGGGAAATGGTCTATAAGCTTTCCTAGAGGGAAGGCTGATACATGCTGGTTGTATACGCTCTTGGCGATGATTGGTGAACAGTTTGAACATGGTGATGAGATATGTGGGGCAGTTGTTAATGTCCGGGGTAAGCAAGAAAAAATTGCTCTATGGACCAAAAATGCTTCAAATGAAACTGCTCAGATGAGCATTGGGAGACAGTGGAAGGAGTTTCTTGATTACAATGACAGCATAGGTTTTCACCCAAGAACAGCTTCATCGTGCTATTGCAAACTCTTCATGGAGACCCATAAAAAAAAAAACTCTTCATGGAGATTTCTTTTCCCCGATGTTGTGCTCAATAATCTCACAAACCTTGAATCGGATCACTACCTTATGCTGCTCGACTCTCTTCCTGAGTTGAACAAACTGCCAAAACCCTTCCATTTTCTTTCCATGTGGACAAAAGAGCCTGAATGTCAGAAGATTGTGGAATTTGTCTGGAAGGAAATACAATCAGGTTCAAAACAATCTCAGGTGCGGAAGAAACTTCTCAGAACTAAATTGAGAATCAAACGTTGGAATGTTGAAAAAGGGGCCAATATTCATGATAAGGTTCTCGAGAGTCTTGAAGTCTCTCACTTGTACAGGAAATTGGGGTTGTGTCCAACAAAGAGTTCCACCATTGCTGAACTACCATGTTCTCTAAACTATCATGATGTTTGA 1068 0.4438 MGAAEEAASVGVGFTPEDEGIEVEAEEGEILEPLATSIVPQQPLHPLEHSWTFWFDNPFAKSKQAAWGSSIRPIHTFATVEEFWSLYNNINHPSKLAIGADFNCFKYQIEPKWEDPVCATGGKWSISFPRGKADTCWLYTLLAMIGEQFEHGDEICGAVVNVRGKQEKIALWTKNASNETAQMSIGRQWKEFLDYNDSIGFHPRTASSCYCKLFMETHKKKNSSWRFLFPDVVLNNLTNLESDHYLMLLDSLPELNKLPKPFHFLSMWTKEPECQKIVEFVWKEIQSGSKQSQVRKKLLRTKLRIKRWNVEKGANIHDKVLESLEVSHLYRKLGLCPTKSSTIAELPCSLNYHDV* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01418 355 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 38 212 IPR001040 GO:0003723|GO:0003743|GO:0006413
Eupl04g01418 355 ProSitePatterns Eukaryotic initiation factor 4E signature. 101 124 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Eupl04g01418 355 Gene3D RNA Cap, Translation Initiation Factor Eif4e 38 213 IPR023398 -
Eupl04g01418 355 SUPERFAMILY eIF4e-like 32 204 IPR023398 -
Eupl04g01418 355 Pfam Eukaryotic initiation factor 4E 46 198 IPR001040 GO:0003723|GO:0003743|GO:0006413
Eupl04g01418 355 FunFam Eukaryotic translation initiation factor 4E 37 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01418 Eupl-Chr4 22782891 22799588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01418 35 201 Eukaryotic Initiation Factors Gene Family AT4G18040 75.449 1.61e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01418 K03259 - qsa:O6P43_032055 311.997