Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01417 ATGGGACATTCCGAGTATTCTAAACCTCCCTTTCTCCAATTCCTAGCCTTAATCTTATCCATTTTCTGCATTTTTAGCATGAATTCCCATGCAGTAGACCCTTCTTTAACGTTGGATTACTATTCATCTTCCTGTCCGACTGCATTCGAGATTATAAGGAAAGAGATGGAATGCGCTGTGCTCTCCAATCCGCGTAACGCCGCATCCATATTACGGTTGCATTTTCATGACTGCTTTGTTCAGGGTTGCGATGGGTCAGTGTTGCTAGATGACACAATCACACTCGAAGGAGAGAAGAAAGCAGCAACTAATGTGCACTCTCTGAGAGGCTTCAGGTTGATCGATAGGATCAAGAACAAGCTCGAATCTGATTGCCCCGGAATTGTTTCTTGTGCAGATTTACTTACCATTGCAGCCAGAGATGCTGTAATTCTGGTTGGTGGACCTTACTGGGATGTTCCAGTAGGCAGAAAGGATTCTACAACTGCAAGCTTGAGCCTAGCAAACACAAATCTTCCTACTGCTGATCAGAGCCTCCTCGCTCAAATTTCATCCTTCCTTTATCAAGGGCTCTCAGTCACAGATTTGGTGGCTCTTCTGGGCTCACACACCATAGGCTTGGCTCGATGCCAAAACTTCCGCGGGAGGATTTACGGAGACTTTGAGGAAACTGCAGACAAGAATCCCGTCAGTGAGACATACCTTAGCAACCTGAAATCTATATGCCCAGCAGCTGGAGGAGGAGACGATAACACAACCGCAATGGATTTTATTACGCCGAACCTTTTTGACAATTCCTTCTACCACATACTGCTGAGAGGGCAGGGACTACTGAGCTCAGACCAGCAACTGTATTCGAGCATGTTCGGGATTGAAACAAAGAAGCTTGTTCAGAAGTATGCAGAAGATCAACTTGCTTTCTTCCAACAGTTCTCGGATTCCATGGTGAAGTTGGGAAATATTACCAATTCTGATAGCTTTATCACAGGGGAAGTAAGAAAGAATTGCAGATTTGTGAACACATAA 1026 0.4483 MGHSEYSKPPFLQFLALILSIFCIFSMNSHAVDPSLTLDYYSSSCPTAFEIIRKEMECAVLSNPRNAASILRLHFHDCFVQGCDGSVLLDDTITLEGEKKAATNVHSLRGFRLIDRIKNKLESDCPGIVSCADLLTIAARDAVILVGGPYWDVPVGRKDSTTASLSLANTNLPTADQSLLAQISSFLYQGLSVTDLVALLGSHTIGLARCQNFRGRIYGDFEETADKNPVSETYLSNLKSICPAAGGGDDNTTAMDFITPNLFDNSFYHILLRGQGLLSSDQQLYSSMFGIETKKLVQKYAEDQLAFFQQFSDSMVKLGNITNSDSFITGEVRKNCRFVNT* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01417 341 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 FunFam Peroxidase 39 184 - -
Eupl04g01417 341 CDD secretory_peroxidase 36 339 IPR033905 GO:0004601|GO:0042744
Eupl04g01417 341 Pfam Peroxidase 53 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 Gene3D Peroxidase, domain 2 173 318 - -
Eupl04g01417 341 PANTHER PEROXIDASE 72-RELATED 32 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Eupl04g01417 341 Gene3D - 40 340 - -
Eupl04g01417 341 ProSiteProfiles Plant heme peroxidase family profile. 35 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Eupl04g01417 341 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl04g01417 341 FunFam Peroxidase 173 318 - -
Eupl04g01417 341 SUPERFAMILY Heme-dependent peroxidases 36 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01417 Eupl-Chr4 22765945 22769522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01417 11 341 Peroxidase AT1G68850 66.265 5.19e-171 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01417 K00430 - ming:122061458 536.954