Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01415 ATGCTATCATTGCAGTTAAGACTACGCAAGATGGATCCTGGAATCATGAAGCGTACCTGTTATTTCCAGTTCATTTGGATGGAACCCTTATTCGACAATGCCAAAGCTATGAAAGCAAAAAAAGAGTTCTTTTCTACAATTGAGGTTCTTCAGATATTCCGACAGCTTTGTGCAGGACTGAAGCATATGCACAGTTACGAACCTCCATACGCACACAATGATGTCAAACCAGGTAATGTCCTCATCACACGCAGGAAAGGGCAACCACCACTTGCCATATTGATGGATTTTGGAAGTGCTCGGCCTGCAAGGAAGGAAATACGCTCCCGTTCCGAGGCTCTACAATTGCAGGAATGGGCTGCGGAGCACTGTTCTGCACCTATCCGAGCCCCCGAGTTGTGGGATTGCCCGAGCCATGCAGATCTTGATGAGAGAACGGATATTTGGTCTCTAGGATGCACCTTGTATGCAATTATGTACGGCATATCCCCTTTCGAATATGCACTTGGTGAATCAGGAGGAAGCTTGCAACTAGCCATCATAAATGCTCAGATAAAGTGGCCAGCTGGGCCTAATCCCCCGTATCCTGAACCTCTCCATCAGTTTGTGACATGGATGCTCCAACCTCAGGCTGCGGTCCGTCCTCACATCGACGATATCATTATTCACGTCGACAAGTTGATCTCGAAGTTTTCCGCCTGA 702 0.4744 MLSLQLRLRKMDPGIMKRTCYFQFIWMEPLFDNAKAMKAKKEFFSTIEVLQIFRQLCAGLKHMHSYEPPYAHNDVKPGNVLITRRKGQPPLAILMDFGSARPARKEIRSRSEALQLQEWAAEHCSAPIRAPELWDCPSHADLDERTDIWSLGCTLYAIMYGISPFEYALGESGGSLQLAIINAQIKWPAGPNPPYPEPLHQFVTWMLQPQAAVRPHIDDIIIHVDKLISKFSA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01415 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Eupl04g01415 233 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 22 231 - -
Eupl04g01415 233 Pfam Protein kinase domain 34 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01415 233 Gene3D Transferase(Phosphotransferase) domain 1 14 232 - -
Eupl04g01415 233 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01415 233 SUPERFAMILY Protein kinase-like (PK-like) 29 223 IPR011009 -
Eupl04g01415 233 SMART serkin_6 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01415 Eupl-Chr4 22723604 22751531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01415 30 223 EF-hand Containing Proteins AT4G04710 26.131 2.48e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Eupl04g01415 Pkinase 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01415 K08856 - nnu:104597820 402.519