Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01414 ATGTCAATCGTTGGATTCTCTCTTCCTCCCCCCTTGCTTGCTTACAGTTACAACCCCCCACCCCCTACTGTGCAGAGACATGAAACAGAGATAAGAGAGAATTTAGACTTCAGAGGTGAGAGAGAAATCGAGAAAAATATTAACAGTAGTATGTTGAAGGAAGAGGTGAGTTCCGGCGGCGGTGGCAGGCTGGCCCGTGTGTGTGACTCGTGTCGCGCTGCGGCCTGCACAGTCTACTGCAGGGCTGACTCGGCGTACTTATGTGCCAGGTGTGACGCGCGGATACACACCGCCAACCGAGTGGCATCCCGGCACGAGCGCGTGGGGGTGTGCGAGGCGTGTGAGCGGGCGCCTGCAGCTTTTACCTGCAAGGCTGATGCCGCAGCCCTCTGCACCACCTGTGATGCTGACATACACTCGGCCAACCCACTCGCGCGCCGCCACCACCGTGTCCCAATCATTCCAATCTCAGGCAGCATGTATGAGCCTTTCGCTAACCATCTTAGTAGGCCACTGGGGTCAGAAGCCAACTTGGAAGACAGTTTCTTAGCCCCAGAAGCCGAAGCCGACAAGGAAGTAGAGGAAGAAGACGAGGATGAGGCAGCATCCTGGTTGTTGCTTAATCCTGTCAAGAACAACAACCAGAGTAATGGGTTCTTGTTTGGTGGGGAGGTCGACGAGTACTTGGATCTTGTCGAGTACAATTCTTGTACTGAGAACCAGTACCAAGATCAATACAATCATCATCATCATCAGCAGCAGCAGCAGCAGTACTACAGTGTTCATCAGAACCCTGGGAAGAATGATGGGACTGAGTGTGTTGTGCCAGTTCAGTATGGGACAGTAAAGGAGCAACAACAGCAGCTTCAGTTGAAGATGGAATATGAGGCCTCAAAAGCTGGGTTCAGTTACACTACTTCTTCAATTAGTCACAGTGATAAGGTCTCCTTGTCATCTATGGACGTTGGCGTTGTACCGGACGCTACAATGAACGATATCTCAAACTCACACAATAGACCTCCCAAAGGAACAATTGACCTCTTCTCAAGCCCTCCCCTTCAGATGCTACCTCAATTCACTCCCATGGACAGGGAAGCCAGAGTACTTAGATATAGGGAGAAGAAAAAGACAAGAAAGTTTGAGAAGACAATAAGGTATGCCTCGAGGAAGGCCTATGCAGAGACCAGGCCCCGAATCAAGGGCCGGTTTGCTAAGAGAAAAGATGTAGAACTTGAAGTGGATCAGATGTTCACAACCGTAATGGCTGAAAGCGGATACAGCATTGTCCCATCGTTCTAA 1299 0.5058 MSIVGFSLPPPLLAYSYNPPPPTVQRHETEIRENLDFRGEREIEKNINSSMLKEEVSSGGGGRLARVCDSCRAAACTVYCRADSAYLCARCDARIHTANRVASRHERVGVCEACERAPAAFTCKADAAALCTTCDADIHSANPLARRHHRVPIIPISGSMYEPFANHLSRPLGSEANLEDSFLAPEAEADKEVEEEDEDEAASWLLLNPVKNNNQSNGFLFGGEVDEYLDLVEYNSCTENQYQDQYNHHHHQQQQQQYYSVHQNPGKNDGTECVVPVQYGTVKEQQQQLQLKMEYEASKAGFSYTTSSISHSDKVSLSSMDVGVVPDATMNDISNSHNRPPKGTIDLFSSPPLQMLPQFTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRKDVELEVDQMFTTVMAESGYSIVPSF* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01414 432 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 68 418 IPR045281 GO:0009909
Eupl04g01414 432 SMART bboxneu5 111 153 IPR000315 GO:0008270
Eupl04g01414 432 SMART bboxneu5 63 110 IPR000315 GO:0008270
Eupl04g01414 432 Pfam B-box zinc finger 108 153 IPR000315 GO:0008270
Eupl04g01414 432 ProSiteProfiles CCT domain profile. 364 406 IPR010402 GO:0005515
Eupl04g01414 432 ProSiteProfiles Zinc finger B-box type profile. 63 110 IPR000315 GO:0008270
Eupl04g01414 432 CDD Bbox1_BBX-like 110 153 - -
Eupl04g01414 432 Pfam CCT motif 364 406 IPR010402 GO:0005515
Eupl04g01414 432 ProSiteProfiles Zinc finger B-box type profile. 106 153 IPR000315 GO:0008270
Eupl04g01414 432 CDD Bbox1_BBX-like 67 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01414 Eupl-Chr4 22717562 22720111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01414 51 432 C2C2-CO-like Transcription Factor Family AT3G02380 55.102 1.01e-131 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Eupl04g01414 zf-B_box 2.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01414 - K12135 nnu:104600461 493.426