Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01401 ATGCATCCGGGTGAGGTCGCCGGACTCAACTATTTAGCACATGCAAACCCAACCCCGTACCCCGCTCACTTTAGCATGATGCAGAGCAACATACCCAACCTCCATTTCAGCAGATTCTTAACACCTTTATCCCATTCTCAGATTCCCACTCCTGTCCATGAATTCACTCCACAGTCATGTCTCAGCAATAATTCAACTTCTGACGAGGCAGAGGAGCACCAACTGCATGTAATTGACGAGAGGAAGCAGAGGAGAATGATATCAAATAGAGAATCTGCTCGTCGTTCAAGAATGCGTAAGCAGAAGCACCTAGATGAACTCTGGTCACAGGTTGTTCAGCTCCGATCTGAGAACCGTCAGCTCATTGACAAGCTGAACCATGTGTCGGAGTGCCATGACCGGGTTGTTCAAGAAAACACCCACCTCAGAGAAGAAGCTTCTGAACTTCGCCAAGTGCTCAGAGACCTGCAACTTGATAATCCTTACAATGCTTTGAGAGATCTAGAAGAAGTCCCGTGCAACACAGCTCACCTCATAGCCGAATCCTCAAACCAAACCATCACTAGTTCTATGGATTTGCTCTATTGA 588 0.4711 MHPGEVAGLNYLAHANPTPYPAHFSMMQSNIPNLHFSRFLTPLSHSQIPTPVHEFTPQSCLSNNSTSDEAEEHQLHVIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVQLRSENRQLIDKLNHVSECHDRVVQENTHLREEASELRQVLRDLQLDNPYNALRDLEEVPCNTAHLIAESSNQTITSSMDLLY* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01401 195 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 168 IPR044521 -
Eupl04g01401 195 CDD bZIP_plant_GBF1 82 133 IPR045314 GO:0003700|GO:0006355
Eupl04g01401 195 FunFam BZIP transcription factor 79 130 - -
Eupl04g01401 195 Coils Coil 139 159 - -
Eupl04g01401 195 Gene3D - 79 134 - -
Eupl04g01401 195 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Eupl04g01401 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 130 IPR004827 GO:0003700|GO:0006355
Eupl04g01401 195 SUPERFAMILY Leucine zipper domain 81 130 IPR046347 GO:0003700|GO:0006355
Eupl04g01401 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Eupl04g01401 195 Pfam bZIP transcription factor 81 130 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01401 Eupl-Chr4 22550269 22550856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01401 18 167 bZIP Transcription Factor Family AT3G30530 53.750 2.26e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl04g01401 bZIP_1 1.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01401 - - nnu:104597833 305.834