Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01374 ATGGAGCTTCCTCAACCTCGTCCCTTTGGAACCGAAGGTAAAAAACCAACACGTGATTTCCTTCCACTGTACAGCCATTCATCTTTCCAGCACCAAGATCCAAGGCCTTCTCAAGGAATTCACCTTATAACTCATGATTTTCTACAACCACTTGAAAGGATAGGGAAGAACAGCGGTAAAGGAGAAAAAACAGTGGAGAAAGCTACCATTGAAAAGCGGTCACCACCTTCTAGTTCTTCAGGGGAACGTGTTCTTCCCGGGGGGATCGGTACCTATAGTATAGGTCACATTCCCACTTACAATCAACAGGTTCCAAAGGCTGAGAGAAACGTGTGTGCTGTAGTTCAAGCGAGCAGTGCAGAGAGAAACAATGAAATTAAAAAAGCTAACTCTAACTGTAACTCATACGGAGGAGGCGTATTTACATTATGGGAAGAATCTGCTGTGAAGAAGGGAACGGCAGTGAAGGCGTCGCCTGCAGAAAGACAAGTGATAAAAGTATCGACGGAGAAGTTAGGGCAGTGGTCGTCGGAGTGGCCAATACAAGCTCCTTTCATACATCGCAACAGCTTCAGCCCTCTGTCATCTTCCAAGCAATCAGCCCAGAAAAATCAGAGCTTCATGGAGATGATGAAATCTGGGAAGGGTCTTCATGAAGATGAAGACGACGACGAGGAAGAGTTCCTTGTGAAGAAAGATGGCTCTTCCCAGAAAGAATTGACTGTAAAAGTAGACGGGAAGAACACTGATCAAAGGGCTAACACGCCACGATCGAAGCACTCTGCCACAGAGCAGCGTAGAAGGAGCAAAATCAACGACAGATTTCAGATATTGAGAGATCTCATACCCCAGAATGATCAAAAGAGAGATAAGGCATCATTCTTATTAGAGGTCATCGAGTACATTCAGTTTTTACAGGAAAAAGTAAATAAGTATGACGCTTCATACCAAGGATGGAATCAGGAGCCCATGAAATTGACACCATGGAGAAATGGTCATGGACCAGGAGAAAATATTGTTGATCATTCTCGAGCAATAAAGAATGGCCCTGGTCCTGTGTTGATGTTTTCTGGAAATGACAACAATATTGCTGTCGCCCCTACCATGCTTGCAAACACACAGACCCCAGTAGAATCTAACCTGAGCACAAGTACCACCTACAAAACAATGGATCACAACCCTGGGCTATCAAACAAGGCCGTACCCATGCCCATTCCTTTGCAACCAAACATGTTCAATCCTGTTGGGAGGAGCGGTGCACTTGCCCAACCTCTGCAGAGACCTATCTCTGATGCAGAGAACATGACATCCCAACCTCAATCCCAGTTGTGGCAAAGTAGACCATGTGCAACCGAGTGCCCAATCACAGATGATGCAATGAATGAACAGGAGCTGACTATGGAAGGGGGCACAATCAGCATCTCAGCTGTCTACTCTCAAGGGTTGTTGAATAATTTGACACAAGCATTGCAGAGCTCAGGCGTTGATCTGTCACAAGCCAGTATCTCAGTGCAAGTTGATCTTGGGAAGCGAGCACTTAGTAGACTGACCACTACAACATCCAGTGCTAAGGATTATGAGGACCCTTCTAGGATTGGAAGCAGTGGCGAGGACTCGGATCAAGCTCAAAAGAGGCTCAAGACAGAAAAAAACTAG 1656 0.4565 MELPQPRPFGTEGKKPTRDFLPLYSHSSFQHQDPRPSQGIHLITHDFLQPLERIGKNSGKGEKTVEKATIEKRSPPSSSSGERVLPGGIGTYSIGHIPTYNQQVPKAERNVCAVVQASSAERNNEIKKANSNCNSYGGGVFTLWEESAVKKGTAVKASPAERQVIKVSTEKLGQWSSEWPIQAPFIHRNSFSPLSSSKQSAQKNQSFMEMMKSGKGLHEDEDDDEEEFLVKKDGSSQKELTVKVDGKNTDQRANTPRSKHSATEQRRRSKINDRFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKVNKYDASYQGWNQEPMKLTPWRNGHGPGENIVDHSRAIKNGPGPVLMFSGNDNNIAVAPTMLANTQTPVESNLSTSTTYKTMDHNPGLSNKAVPMPIPLQPNMFNPVGRSGALAQPLQRPISDAENMTSQPQSQLWQSRPCATECPITDDAMNEQELTMEGGTISISAVYSQGLLNNLTQALQSSGVDLSQASISVQVDLGKRALSRLTTTTSSAKDYEDPSRIGSSGEDSDQAQKRLKTEKN* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01374 551 Coils Coil 302 322 - -
Eupl04g01374 551 ProSiteProfiles ACT domain profile. 471 551 IPR002912 -
Eupl04g01374 551 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 255 305 IPR011598 GO:0046983
Eupl04g01374 551 MobiDBLite consensus disorder prediction 52 85 - -
Eupl04g01374 551 Pfam Helix-loop-helix DNA-binding domain 257 306 IPR011598 GO:0046983
Eupl04g01374 551 MobiDBLite consensus disorder prediction 229 270 - -
Eupl04g01374 551 MobiDBLite consensus disorder prediction 1 21 - -
Eupl04g01374 551 Gene3D - 252 326 IPR036638 GO:0046983
Eupl04g01374 551 MobiDBLite consensus disorder prediction 530 551 - -
Eupl04g01374 551 CDD bHLH_AtBIM_like 254 330 - -
Eupl04g01374 551 FunFam BHLH domain class transcription factor 253 325 - -
Eupl04g01374 551 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 255 333 IPR036638 GO:0046983
Eupl04g01374 551 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 11 549 IPR044295 GO:0003700|GO:0006351|GO:0046983
Eupl04g01374 551 SMART finulus 261 311 IPR011598 GO:0046983
Eupl04g01374 551 MobiDBLite consensus disorder prediction 56 70 - -
Eupl04g01374 551 MobiDBLite consensus disorder prediction 213 270 - -
Eupl04g01374 551 MobiDBLite consensus disorder prediction 519 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01374 Eupl-Chr4 22009165 22027435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01374 1 548 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 41.567 2.20e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl04g01374 HLH 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01374 - - nnu:104600095 676.781