Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01356 ATGCAGGATTTGTGGGTCGCACTGCACCCTAATATTGAATCACAGCCGATGTATTATGATGCAATGTTAAATGGGCTGGAGATCATCAAATTAGCCGATAGTAACAACAATCTCGCGGGACACAAACAGGTGGTGGACCCAGCTCCAGCACCAGCTCGGTTCGTAATTGGAGGTGGTGGGGTTGTTACACTCTCTCTTCTATGTTTACTTCTTTTCTGGCTTTGGAGACGAGTGATGTGGTCGTCATGTGGGATCCCACACAGAAAGACAAAGACGTCGTCTCTAGACTCTCTACCGTCAGATCTTTGCGGACACTTCTCCTTCAGCGAGATCAAAGCAGCGACTAACAATTTTGATGAGGATCTGCTAATCGGTGTCGGTGGCTTCTGCAATGTTTACAAGGGCTACATTGATGGTGGTGCCACCACAGTCGCTATCAAGCGTGGGAATCCCAAGTCAGAACAGGGGGCCCACGAATTCCAAACAGAGATCGAGATGCTCTCTAAGCTCCGTCACCTCCACCTTGTGTCACTGATCGGGTACTGCAAGGAGGATCCAGAGATGATCCTCGTCTACAACTACATGGCCCAAGGTACCCTACGTGATCATCTCTGTAATAAAACCAGAAACCACCACTTCCGTGGAATCAGAGGCTCAAGATTTGCATTGGTGCAGCTCGTGGTGTGCAGTGTGCACTACCTCCACACGGGCGGAAAGCACACAATCATCCACCGTGATATAAAGACAACCAACATACTGTTGGATAAGAAATGGATGGCTAAGGTTTCAGATTTCGGGTTGTCGAAGGTGGGGCCCGTCACGATGTCCCATACCCATATCACCACTACTGTGAAAGGTAGTTTTGGGTATTTGGACCCGGAGTACTACAAGCGTCGGAAATTGACGGAGAAATCGGATGTACTGCTCAACGGTGGACGAGGAGAATGTAAGCTTGGCAGAATGGGCCCTTCATTGCCATCAAAAGGGGACCCTCGATCAGATCATGGACCCATATCTAAGGGGAAAGATGGCGCCCGAGTGTTTTATGAAATTCACCGAGATCGCCCAGAGGTGTCTGTCCAATCGCGGGATTGA 1095 0.4941 MQDLWVALHPNIESQPMYYDAMLNGLEIIKLADSNNNLAGHKQVVDPAPAPARFVIGGGGVVTLSLLCLLLFWLWRRVMWSSCGIPHRKTKTSSLDSLPSDLCGHFSFSEIKAATNNFDEDLLIGVGGFCNVYKGYIDGGATTVAIKRGNPKSEQGAHEFQTEIEMLSKLRHLHLVSLIGYCKEDPEMILVYNYMAQGTLRDHLCNKTRNHHFRGIRGSRFALVQLVVCSVHYLHTGGKHTIIHRDIKTTNILLDKKWMAKVSDFGLSKVGPVTMSHTHITTTVKGSFGYLDPEYYKRRKLTEKSDVLLNGGRGECKLGRMGPSLPSKGDPRSDHGPISKGKDGARVFYEIHRDRPEVSVQSRD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01356 364 ProSiteProfiles Protein kinase domain profile. 118 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01356 364 Gene3D Transferase(Phosphotransferase) domain 1 195 308 - -
Eupl04g01356 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Eupl04g01356 364 SMART serkin_6 118 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01356 364 Gene3D Phosphorylase Kinase; domain 1 82 194 - -
Eupl04g01356 364 MobiDBLite consensus disorder prediction 315 345 - -
Eupl04g01356 364 Pfam Protein kinase domain 122 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01356 364 FunFam Receptor-like protein kinase FERONIA 90 194 - -
Eupl04g01356 364 SUPERFAMILY Protein kinase-like (PK-like) 86 307 IPR011009 -
Eupl04g01356 364 PANTHER OS07G0166700 PROTEIN 103 307 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01356 Eupl-Chr4 21702978 21704072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01356 2 307 Receptor kinase-like Gene Family AT3G51550 53.757 1.62e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g01356 Pkinase 2.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01356 - - nnu:104593747 348.977