Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01339 ATGGTTGGGCTTGCAGTGTGGGGAGTAAACGAACAAGGGTGGAGAAAGGGCCCTTGGACTGCTGAAGAAGATAACTTGCTTACTGAATATGTTACTTTGCATGGGGAAGGAAGATGGAGTTCTGTCGCTAGATGGTCTACAATTGCCCGATGCTTGCCTGGGAGGACAGACAATGAGATCAAGAATTACTGGAGAACTCATTTCAAGAACAAAGCAAAATCGTCACATCGAGCTCTGAAACGACAAGAAGTAGAGAAACACCAACAGCAACAACAAATGCTGCAACAGCAGCAACAAAAACAACTAGAAGAGGAGTATGATTATAGGGTAGTTTTGGGACAAGGTAGGGAAGAGATGGTCTCCATGTACCCAAACATGGAGGAGCAATGCCTGCCTGTGATGTTTCAAGATGGAACTTCCTTGCCTGACTCCACAGGTGATCAGGAGGGACTGTGGGGAGGCTTGTGGAACTGGGATGATGAACATGCCCCATTTTGGCCACACGTGTGA 510 0.4706 MVGLAVWGVNEQGWRKGPWTAEEDNLLTEYVTLHGEGRWSSVARWSTIARCLPGRTDNEIKNYWRTHFKNKAKSSHRALKRQEVEKHQQQQQMLQQQQQKQLEEEYDYRVVLGQGREEMVSMYPNMEEQCLPVMFQDGTSLPDSTGDQEGLWGGLWNWDDEHAPFWPHV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01339 169 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 44 100 IPR044676 GO:0003700|GO:0006355|GO:0043565
Eupl04g01339 169 Gene3D - 18 106 - -
Eupl04g01339 169 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Eupl04g01339 169 CDD SANT 18 68 IPR001005 -
Eupl04g01339 169 SUPERFAMILY Homeodomain-like 12 74 IPR009057 -
Eupl04g01339 169 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 72 IPR017930 -
Eupl04g01339 169 MobiDBLite consensus disorder prediction 75 98 - -
Eupl04g01339 169 SMART sant 15 70 IPR001005 -
Eupl04g01339 169 Coils Coil 77 104 - -
Eupl04g01339 169 ProSiteProfiles Myb-like domain profile. 11 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01339 Eupl-Chr4 21331288 21332174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01339 13 161 MYB Transcription Factor Family AT3G30210 36.098 3.82e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl04g01339 Myb_DNA-binding 4.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01339 K09422 - rcu:8276947 147.902