Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01337 ATGGGTTCATCTCCGCCACTAAAGCCCTTCATTGATATCAGTCTCAACTTAAGCCTATCTTCCCCTCCCCTTGAAACGCTAAAACCCGAAGAAAGAGGAATCCGTCTCATCCAGCTCTTGCTAAACTGCGCCACCCATGCTTCCTCTGGTAACCTCCACCGTGCTGACACTTGTCTCCACCAGATCTCCCAGCTCTCCTCCATCTCCGGCGACTCCATGCAGCGTCTAGCCGCCCGATTTTCCGCCGCTCTCGCCGTTCGGCTTGTCAAGCGCTGGCCCGGTCTTTATAGAGCTCTCAACCCGTCTCAAAGGCCCAAACACGACCCGGACCGAACCGTTTCTGTTTTTGCCCGAGCCTTTCCTTATCTTGGCTTCTCCTACGAAATCATCAACCAAACCTTACTCCGAACCATGACCGACGAGCGTGTCGTCCACGTTTTCGACCTAGGCTCGGGTGATCCAAACCTATGGTATCCAATACTCCGGAGCTTCTCACAATCGCCACGTGGACCTCCCCATTTGAAGATCACGTGTGTGAATAGTAACAAAGATGTGCTAGAGAACTTGGGGCGAAAGCTGGTAAAAGAGGCTGAGGCTTTAGACATACCTTTTCAATTTAACCCTTTAAATGTTGGTTTAAGAGATGTTACAATGGACATGATTAAGGTGAGATCAGGTGAAGCATTAGCTATTACATCTGTGTTAAATCTACATGTCTTATTGGCCGAGGACGATCGCGTCGACGTACATTTTGGGGTCAACAAGATTGACGGTGTTAAGGATTGCAAGCAGATGAATCGTTTCCTCGCAATGGTTCGATCGATGTCACCTAAGGTGTTACTCTTAGTCGAGCAAGAGTCCGATCACAATTTGGCTCGTTTGGTGGACCGATTCGTCGAAGGATTGTACTATTACAGTGCAGTGTTTGATTCTGTAGATGCTAATTCAGGGTCATTGTCGTGTCAGGAGCGGTTGGCACTAGAAGAAATGTTTGGGCGAGAGATTGAGAATATTGTAGCATGCGAAGGGGCCGAGAGGGAGGAGAGACATGAACGGTATGTAAGGTGGATGGTTAGGTTTGGTCGGGCTGGGTTCAAGCCAGTACGACTATGGTATGAAGCAATGGAGGACGCAAAGCGATTAGTCGAATGTTTCGGGAGGGATGGCTACAAGGTTGTGAATGAGAGGGGGAGCCTAATGATATGCTGGCACGAACGACCTCTTTATGCGGTATCGGCGTGGCATTGTTCGTAA 1254 0.492 MGSSPPLKPFIDISLNLSLSSPPLETLKPEERGIRLIQLLLNCATHASSGNLHRADTCLHQISQLSSISGDSMQRLAARFSAALAVRLVKRWPGLYRALNPSQRPKHDPDRTVSVFARAFPYLGFSYEIINQTLLRTMTDERVVHVFDLGSGDPNLWYPILRSFSQSPRGPPHLKITCVNSNKDVLENLGRKLVKEAEALDIPFQFNPLNVGLRDVTMDMIKVRSGEALAITSVLNLHVLLAEDDRVDVHFGVNKIDGVKDCKQMNRFLAMVRSMSPKVLLLVEQESDHNLARLVDRFVEGLYYYSAVFDSVDANSGSLSCQERLALEEMFGREIENIVACEGAEREERHERYVRWMVRFGRAGFKPVRLWYEAMEDAKRLVECFGRDGYKVVNERGSLMICWHERPLYAVSAWHCS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01337 417 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 411 IPR005202 -
Eupl04g01337 417 Pfam GRAS domain family 36 414 IPR005202 -
Eupl04g01337 417 ProSiteProfiles GRAS family profile. 27 415 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01337 Eupl-Chr4 21295410 21297137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01337 3 416 GRAS Transcription Factor Family AT1G50420 42.094 1.74e-119 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl04g01337 GRAS 2.6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01337 - - csin:114286195 592.038