Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01331 ATGAGAAAAGACCAGGCACAACGTTTTCTCTCTTCTTCAGTCTTCTGTCTTCAATCTCTGTTGCAGGTTTCGACCCTCAAGCTCTCAAAGAAGAGGGGGAAGAACACCAAAAGAAAAACTGCAACAAAAATGGGTTGTGTCCTCCTCTCCATGACCAGCTCCATTTCAAAGCTTGCCAACTGCACCATTTTGCTTGCGTTTTTGCTTTTCTGCTTCAGTTTCACTTCAACTGAAGCCTATGATGCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATCATGAGCTGGACTCCAGATGGCTACGTTGCTGTTATTACAATCTACAACTTCCAGCAATATCGTCATATTCAAGCACCGGGATGGACTCTGGGATGGACGTGGGCAAAGAAAGAGGTGATCTGGAGCATGCTGGGAGGCCAAACCACAGAGCAGGGGGATTGTTCGAAATTCAAGGGCAGTATCCCGCATTGCTGTAAGAAGGATCCAACAGTCGTTGATTTATTGCCGGGAACTCCTTACAACCAGCAGATTGCAAATTGCTGCAAAGGAGGGGTAATCAATTCACAGGTCCAGGATCCGGCCAACGCAGCAAGCTCGTTCCAGCTTAGTGTGGGTTTGGCTGGAACTTCTAACAAGACTGTCAGATTGCCAAAGAATTTCACACTGAAAGCACCGGGTCCTGGATACACATGTGGACCCGCAAAGATTGTTAGACAGAGTAAATTTACAACGGCAGATCAAAGGAGAGTGACCCAAGCTTTGATGACATGGAATGTTACCTGCACATATTCTCAATTCCTCTCTCAGAAGACTCCCACGTGCTGTGTCTCGCTTTCCTCCTTCTATAACAACACAATTGTCCCCTGCCCGGCATGCACTTGTGGCTGCCAGAACAATATAACTCAGCCAGGAAGCTGTGTGGAGGGAAACTCGCGGTATTTAGCTTCTGCTATTGCAGGTCCTGGCAAAAATAGCTATACGCCTTTAGTCCAATGTACCAGCCATATGTGCCCGATCCGCATTCATTGGCATGTGAAGCTCAACTACAAAGAATACTGGCGGGTGAAGGTCACAATCACGAATTTCAATTACAGGATGAACTACACACAGTGGAACTTAGTCGTCCAACACCCAAATTTCGACAATCTCACCCAGATTTTCAGCTTTAATTACAAGTCATTAACTCCTTACGCTGCCATAAATGATACTGCCATGCTATGGGGGATTAAATTCTACAATGATTTACTCATGCAAGCTGGTCCTATGGGGAATGTACAGTCGGAGCTACTCTTCCGGAAGGACAAGGCAACTTTCACTTTTGATAAGGGATGGGCTTTCCCTCGACGTATTTATTTCAATGGTGATAACTGTGTCATGCCACCTCCAGAAGCATATCCATGGTTGCCAAATGCCAGTCCCTTGCCAATAATCTCCATACTTCGTACAATCATGGCTCTCTTGGCATCTTTGGCATTCTTGTTGGCTTATGCCTAG 1500 0.4567 MRKDQAQRFLSSSVFCLQSLLQVSTLKLSKKRGKNTKRKTATKMGCVLLSMTSSISKLANCTILLAFLLFCFSFTSTEAYDALDPNGNITIKWDIMSWTPDGYVAVITIYNFQQYRHIQAPGWTLGWTWAKKEVIWSMLGGQTTEQGDCSKFKGSIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSQVQDPANAASSFQLSVGLAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVRQSKFTTADQRRVTQALMTWNVTCTYSQFLSQKTPTCCVSLSSFYNNTIVPCPACTCGCQNNITQPGSCVEGNSRYLASAIAGPGKNSYTPLVQCTSHMCPIRIHWHVKLNYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGIKFYNDLLMQAGPMGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPEAYPWLPNASPLPIISILRTIMALLASLAFLLAYA* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01331 499 Pfam COBRA-like protein 103 266 IPR006918 GO:0010215|GO:0016020
Eupl04g01331 499 PIRSF COBRA 51 499 IPR006918 GO:0010215|GO:0016020
Eupl04g01331 499 PANTHER PROTEIN COBRA 68 486 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01331 Eupl-Chr4 21162772 21180458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01331 44 489 COBRA Gene Family AT3G02210 74.049 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01331 - - nnu:104597901 852.818