Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01315 ATGCTCACACTCTTCTCCTTCCTCTTCTTCTTTCAACTAGTAATCTCCATCACCACTGCCCATGACTCGGTTTACGTTCCCCCTGATAACATCCTCCTCGACTGCGGTTCCTCTTCGGACACTACAGCATCTGACGGCCGGAATTGGACAGCCGACGAAGGATCAAAGTTCGCGTTGTCAGGCGAAGACAACACATCAACAAAAGCCACTGCGAAAGCCCAAGGCCCCTCTGTCACTCAAGTCCCTTACATGACTACTCGTATCTTTCGCTCTCGATTTACCTACACATTCCCCGTCTCCTCCGCTGGCCCAAAATTCATCCGTCTCTACTTCTATTCTGCTTCCTACTCCGATCTCGACATATCTAAAGCCTTCTTCTCCGTCACCGTGGGTCGCTACACCCTCCTAAGTAACTTCAGCGCCTCCCTCACTGCTGATCATCTCGGTCAATCATACTTCACCAGAGAATTCTCAGTCAACGCAGAGAAAGACCAGAGATTAAATGTAACGTTCACACCATCTCCGGATACTTCCCACGCCTTTGCCTTTGTCAACGGAATTGAGGTTGTTTCAATGCCCTCAAATCTCTACACTCGCGGGGGAGATCTCCCCTTCTTTATTGCCCAACAGAAGAATCTGTTCTCCATACATAATGAAACAACTGCCATGGAGATGGTTTACCGACTAAACGTCGGGGGGAACCTTATCCCACCTGCAGATGATACCGGCATGTTTCGGACCTGGAGCATGGACGATGATTACGTATTGCAGGACGGCGTAAAGCCCCCTAATTGGAACACTACAATCAAATATTCAGAAGAAGTACCTCCTTACACTGCACCGAAGAGCGTCTACTCCACGGCCCGGACGATGGGTCTCAATAAGATGATCAACATGAACTACAATCTAACATGGCGTTTACCTGTCGACTATGGTTTCAATTACTTTATTAGGCTCCATTTCTGCGAGTACCAACCGGAGGTAACGCAACGGTTACAGAGGGTGTTTATTATTTTTATCAATAATCAGACGGCCGAGCCTGATGCGGATGTCATTTTTTGGAGTGGCGGAAACGGAATTCCGGCGATTAAAGACTACGTTGTGAACATTCAAAACGGAAGCGGGACCCAGCAGTATATTTGGATCGCGCTACACCCTGTTCCTGAACATTCTTGGCACTCTAATGCAATCTTGAACGGGCTGGAGATCTTCAAATTGAGTACTGAGCAGGACAACAATCTCGCCGGACCCAATCCTCCCAAAAAAGAACATAAAGAGGACCCTGCTTCGCCTGAACTGTCTTCGGAGAATTCGAAGAAATATCGGACTCCAGTGATCATTGCCGGAGGTGTGGTAGGGGACAAGACATCCCGGTGGTTCATACCTTCCCACTCTGGAGGATCTACAAAAATGACCACGTCTTCACTACCGTCTGATCTCTGCCGCCACTTCTCGTTAGCCGAGATCAAAGCGGCGACCAACAACTTCCACGAAGCTTGTCTCATCGGCATCGGCGGCTTCGGAAGTGTATACAAAGGCCAGATAGACGGTGGAGCCACCACCGTTGCGATCAAGCGAGCGAATCCGACGTCGCAGCAGGGGGTCCACGAGTTCCAAACGGAGATCGAAATGCTCTCAAAGCTTCGTCACCTCCACCTTGTCTCTTTGATCGGGTATTGCCAGGAGGACAAAGAGATGATCCTGGTCTATGATTACATGTCCCACGGCACCCTCCGTGATCATCTCTACAAGACCAGTAATCCCCCTCTTACGTGGAAGAAGAGGCTTGAGATTTGCATTGGAGCAGCACGCGGCTTACATTACCTCCATGCAGGAGCGAAGCACACGATCATCCACCGTGATGTGAAGACAACCAACCTACTATTGGATGAGAAATGGGTGGCCAAACTTTCAGATTTCGGGTTGTCAAAGATGGGGCCCACAACCCTGTCCCGCACCCACGTCAGCACTTTCGTCAAAGGTAGCTTCGGGTATCTGGACCCTGAGTACTTCAGGCGTCAGCAACTAACGGAGAAATCGGACGTGTACTCTTTCGGTGTGGTGTTGTTCGAAGTGTTGTGTGCAAGGCCACCGTTGATTCCGACGTTGGAAAACGAGCAGGCGAGCTTGGCCGAGTGGGCCCGACACTGCTTTCGGAGCGGGACCCCCCTTCATCATATAATTGACCCATATCTTAGGGGGAAGATCGCTCCGGAGTGTCTAAAACAGTTTGCCGAGATCGCTGAGAAATGCGTAGCTTATGATGGAATCGAACGGCCGGCAATGGGCGACGTGGTGTGGAGCCTTGAGTTTGCGTTGCAGCTACAGGAGAATGCAGATGAGAATTTCAAGGGTGGTAGGGCCCACAACGAGACTGACGATGAAGAGACCCCGTTCAGCGCCTCCGCCGCCATACCAACTGACGACGATCACTTACCGTCAAGTGTCGAACATGTTTCGGAATCAAGGAGCAATGGCACAACTGTGACAGGCGTTGGACGACAGATCCTCGCTAGTGGTAGTGATGATTCTGAAAGGCTGATTTCAGGGGACGTGTTCTCAGAGATCTTGAATCCAAATGGACGGTGA 2589 0.5044 MLTLFSFLFFFQLVISITTAHDSVYVPPDNILLDCGSSSDTTASDGRNWTADEGSKFALSGEDNTSTKATAKAQGPSVTQVPYMTTRIFRSRFTYTFPVSSAGPKFIRLYFYSASYSDLDISKAFFSVTVGRYTLLSNFSASLTADHLGQSYFTREFSVNAEKDQRLNVTFTPSPDTSHAFAFVNGIEVVSMPSNLYTRGGDLPFFIAQQKNLFSIHNETTAMEMVYRLNVGGNLIPPADDTGMFRTWSMDDDYVLQDGVKPPNWNTTIKYSEEVPPYTAPKSVYSTARTMGLNKMINMNYNLTWRLPVDYGFNYFIRLHFCEYQPEVTQRLQRVFIIFINNQTAEPDADVIFWSGGNGIPAIKDYVVNIQNGSGTQQYIWIALHPVPEHSWHSNAILNGLEIFKLSTEQDNNLAGPNPPKKEHKEDPASPELSSENSKKYRTPVIIAGGVVGDKTSRWFIPSHSGGSTKMTTSSLPSDLCRHFSLAEIKAATNNFHEACLIGIGGFGSVYKGQIDGGATTVAIKRANPTSQQGVHEFQTEIEMLSKLRHLHLVSLIGYCQEDKEMILVYDYMSHGTLRDHLYKTSNPPLTWKKRLEICIGAARGLHYLHAGAKHTIIHRDVKTTNLLLDEKWVAKLSDFGLSKMGPTTLSRTHVSTFVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPPLIPTLENEQASLAEWARHCFRSGTPLHHIIDPYLRGKIAPECLKQFAEIAEKCVAYDGIERPAMGDVVWSLEFALQLQENADENFKGGRAHNETDDEETPFSASAAIPTDDDHLPSSVEHVSESRSNGTTVTGVGRQILASGSDDSERLISGDVFSEILNPNGR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01315 862 CDD STKc_IRAK 502 770 - -
Eupl04g01315 862 MobiDBLite consensus disorder prediction 412 438 - -
Eupl04g01315 862 MobiDBLite consensus disorder prediction 783 842 - -
Eupl04g01315 862 MobiDBLite consensus disorder prediction 818 837 - -
Eupl04g01315 862 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Eupl04g01315 862 PANTHER OS03G0124300 PROTEIN-RELATED 4 446 IPR046957 GO:0004672
Eupl04g01315 862 FunFam Receptor-like protein kinase FERONIA 468 572 - -
Eupl04g01315 862 SUPERFAMILY Protein kinase-like (PK-like) 470 771 IPR011009 -
Eupl04g01315 862 Pfam Malectin-like domain 33 405 IPR024788 -
Eupl04g01315 862 MobiDBLite consensus disorder prediction 418 433 - -
Eupl04g01315 862 ProSiteProfiles Protein kinase domain profile. 496 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01315 862 Gene3D - 221 408 - -
Eupl04g01315 862 Gene3D - 31 193 - -
Eupl04g01315 862 Gene3D Phosphorylase Kinase; domain 1 462 572 - -
Eupl04g01315 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Eupl04g01315 862 Pfam Protein tyrosine and serine/threonine kinase 501 766 IPR001245 GO:0004672|GO:0006468
Eupl04g01315 862 Gene3D Transferase(Phosphotransferase) domain 1 573 794 - -
Eupl04g01315 862 SMART serkin_6 496 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01315 862 FunFam Receptor-like protein kinase FERONIA 573 791 - -
Eupl04g01315 862 FunFam FERONIA receptor-like kinase 221 407 - -
Eupl04g01315 862 FunFam FERONIA receptor-like kinase 30 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01315 Eupl-Chr4 20562735 20565717 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01315 25 862 Receptor kinase-like Gene Family AT3G51550 55.959 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g01315 Malectin_like 2.8e-50 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01315 - - nnu:104588361 941.414