Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01313 ATGGCAGGAATTGGACAGCCGACTCCGGATCAAAAGAAAGACCAGAGATTAAATGTAACGTTCACACCATCTCCAAATACATCCGACTCCTTTGCTTTTGTGAACGCAATTGAGATTGTTTCGATGCCTTCGAATCTGTACACTCGTGGGGTAGACCTCCCCTTCTTGTTTGCCCAACAGATAATTAGTCAGTTCACCATACATAACGAAACCACTGCCATGGAGACGGTTTACCGACTAAACGTCGGAGGGAACCTTATCTCACCCGGAGATGATACAGGCATGTTTCGAACCTGGGGCATAGACGACCACTACGTTGTATCGTCGTCGAAAGGCGTAGAGCCTCCTAATTGGAACACTACAAATAGTTACTCAGCCGTAGTACCTAACTACACTGTACCGGAGGGGGTCTACACCACATCCAGGACGATGAGTCTCGATAAGACGTTTAACATAAACAACAATCTAACATGGATTTTACCTGTCGATTCTGGCTTCAATTACCTGAGTGGCGGGAACGGAGTTCCGAGGATTAAAGACTACATTGTGAAGGTTCCTGAAGGAAGCGGGGGCAAGCAGGGTCTATGGATCACACTACATCCTATCCCAGAATCAAAGACTCTGTACTCAAGCGCAATCTTAAATGGGCTGGAGATCTTCAAATTGAGTAGTGATGAAGGCAATCTCCCCGGACCCAATCCTCCCCAGAAAGTGGGCCTGTCTCCGCCTGAACTGTCTTCCCCTCTATCAAATAATCCGAAGAAGAATCGAACTCCAGTCATCATTGCCAGAATTGAGATAGGTGGGTTCGTTGCACTATCTGCTCTGTGTTTCTTTGTTTTCCAGCGTCGAGGGAGAGGGAAAAACTCCGCTGTCGACAAGACATCCTGGTGGGTCCTACCCTTCAACTCTGTGGACTTATCAAAATCTAACACGTCATCACTACCGTCGGATCTCTGCTGTCACTTCTCATTTGTCGAGATCAAAGCAGCGACCAACAACTTTGACGAAGCTTGTCTCATCGAGTACAAGGGGCACATCGATGGTGGAACCACCACCGTTGCGATCAAACGAGGGAATCCGACGTCACAGCAAGGGGTCCACGAGTTCCAAACGGAGATCGAGTTGCTCTCGAAGCTCCGTCATCTCCACCTTGTCTCTTTGATCGGGTATTGCCAAGAGAACGAAGAGATGATCCTCGTCTATGACTACATGGCCCACGGTACCCTTCGTGGCCATCTATACAACACCAGTAATCCCCCTGTTCCATGGAAGCAGAGGCTTGAGATTTGCATTGGAGCAGCACGCGGCTTACATTACCTCCATACAGGAGCGAAGCGTACAATCATCCACCGTGATGTGAAGACAACCAACATAATATTGGATGAGAAATGGACGGCCAAGGTCTCAGATTTTGGGTTGTCGAAGACTGGACCCACGACCTTGTCCCGCACCCACGTCAGCACTTTGGTCAAAGGTAGCTTCGGGTATTTGGACCCTGAGTACTTCATGCGTCAGCATCTAATGGAGAAATCCGACGTGTACTCGTTCGGTGTGGTGTTATTCGAGGTGTTGTGCGCAAGGCCAATGTTGATTACGAAGGTGGAGAAAGAGCAGGCAAGCTTGGCCGAGTGGGCCTGA 1641 0.4899 MAGIGQPTPDQKKDQRLNVTFTPSPNTSDSFAFVNAIEIVSMPSNLYTRGVDLPFLFAQQIISQFTIHNETTAMETVYRLNVGGNLISPGDDTGMFRTWGIDDHYVVSSSKGVEPPNWNTTNSYSAVVPNYTVPEGVYTTSRTMSLDKTFNINNNLTWILPVDSGFNYLSGGNGVPRIKDYIVKVPEGSGGKQGLWITLHPIPESKTLYSSAILNGLEIFKLSSDEGNLPGPNPPQKVGLSPPELSSPLSNNPKKNRTPVIIARIEIGGFVALSALCFFVFQRRGRGKNSAVDKTSWWVLPFNSVDLSKSNTSSLPSDLCCHFSFVEIKAATNNFDEACLIEYKGHIDGGTTTVAIKRGNPTSQQGVHEFQTEIELLSKLRHLHLVSLIGYCQENEEMILVYDYMAHGTLRGHLYNTSNPPVPWKQRLEICIGAARGLHYLHTGAKRTIIHRDVKTTNIILDEKWTAKVSDFGLSKTGPTTLSRTHVSTLVKGSFGYLDPEYFMRQHLMEKSDVYSFGVVLFEVLCARPMLITKVEKEQASLAEWA* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01313 546 SUPERFAMILY Protein kinase-like (PK-like) 310 532 IPR011009 -
Eupl04g01313 546 MobiDBLite consensus disorder prediction 225 252 - -
Eupl04g01313 546 Pfam Malectin-like domain 13 169 IPR024788 -
Eupl04g01313 546 Gene3D Transferase(Phosphotransferase) domain 1 405 546 - -
Eupl04g01313 546 PANTHER OS07G0166700 PROTEIN 320 546 IPR045272 GO:0004714|GO:0006468
Eupl04g01313 546 SMART serkin_6 335 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01313 546 ProSiteProfiles Protein kinase domain profile. 278 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01313 546 FunFam receptor-like protein kinase FERONIA 302 404 - -
Eupl04g01313 546 Gene3D Phosphorylase Kinase; domain 1 302 404 - -
Eupl04g01313 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Eupl04g01313 546 Pfam Protein tyrosine and serine/threonine kinase 342 529 IPR001245 GO:0004672|GO:0006468
Eupl04g01313 546 Gene3D - 72 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01313 Eupl-Chr4 20395484 20397591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01313 17 546 Receptor kinase-like Gene Family AT3G51550 53.885 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g01313 PK_Tyr_Ser-Thr 7.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01313 - - vvi:132255095 595.504