Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01310 ATGGGTTGCCAAGGTCTCAGATTTCGGGTTGTCAAAGATGGGCCCTCAAAGTTGGGGCCCATGACCCTGTCCCGCACCCACCAACTAACGGAGAAATCCGACGTGTACTCATTCGATGTGGTGTTGTTCGAAGTGTTGTGTGCAAGGCCAGCGGTATTACAAACGTTGGAGGAGTTGGAGCAGGCGAGCTTGGCCGAGTGGGCCCGACACTGCAATCAGAGCGGGGTCCTCCATCAGATTATCGACCCATATCTTATGGGGAAGATCGCTCCCGAGTGTTTAAAATTGTTTGCCGACATCGCTGAGAACTGTCTAGCTGATCATGGGATCGAACGGCCGGCTATTGGCTACGTGGCATGGAACCTTGAGGTTGCGTTGCAGCTGCAGGAGAATGCCAACGAGAATTGTAGAACCCACAACGTGACTGACGATGTGGTGGAGACCCCATCCAGTGCCTCCGACGACATATCAGCCGATGACGATGTCTTATTGTCAAGTGTGGAACCTGTTTCGGATTCAAGGAGCAATGGTGCAACCGTGACGAGCTTTGGATAA 555 0.5279 MGCQGLRFRVVKDGPSKLGPMTLSRTHQLTEKSDVYSFDVVLFEVLCARPAVLQTLEELEQASLAEWARHCNQSGVLHQIIDPYLMGKIAPECLKLFADIAENCLADHGIERPAIGYVAWNLEVALQLQENANENCRTHNVTDDVVETPSSASDDISADDDVLLSSVEPVSDSRSNGATVTSFG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01310 184 Gene3D Transferase(Phosphotransferase) domain 1 17 149 - -
Eupl04g01310 184 SUPERFAMILY Protein kinase-like (PK-like) 25 119 IPR011009 -
Eupl04g01310 184 PANTHER OS07G0166700 PROTEIN 24 129 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01310 Eupl-Chr4 20236284 20236894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01310 10 137 Receptor kinase-like Gene Family AT3G51550 61.719 4.09e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g01310 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01310 - - nnu:104588361 173.711