Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01309 ATGGAGAAGACCCGCAAAGACACTTGTGGTACTCTCTCAATTCTCATCCCCCCTCTCTACCTCTTCTTCTTCTTCTTCTTCCTCCATCTATTAATCTCCATCACCGCCGATAGCTCGTCTTATAATCCAACCGATAACATCGCCCTCGACTGCGGTGCCTCTTCAGACACTACAACACTAGAAGGCCGGACGTGGAACGCCGACAAAGGATCAAAATTCTTTCTCTTAGGACAAAATGATACATCAACAATCTCCACTGCCCAAGAGCAAGGCCCCTCCATCCCTCAAGTCCCCTACATGACTGCTCGCATCTTTCGCTCTCAATTCACCTACAGCTTCCCTGTTACTACCGGCCCGAAATTCGTTCGCCTCCACTTCTACCCGGCTACATACAATGGTCTCGACAAATCTAAATCATTTTTCTCTGTCACTGTTGGTCGCTACACCCTCCTACGTAACTTCAGCGCCTCCCTCACTGCATCTGGTCTCGATGTAGCATACTTTAGAGAATTCTCAGTCAACGCAGAGGATCAGAGTTTAAACATAACCTTCGCCCCATCTCCAAATGCTTCGGACGCATACGCCTTCGTGAACGGAATTGAGATCGTCTCAATACCTCAAAATCTCTACATTAGCGATGGACATATCCGTTATCTTTTCAATGGACAGTGGATTGAGTTATCTATTGATAATGAAACCATTGCCCTCGAGACGGTTTACCGACTAAACGTCGGCGGGAACGTTATTTCACCCCAAGATGATACCGGCATGTTTCGGAGCTGGTACACCGACCAACAGTACACATTCGGTGGGGATGGTGTAGTCCCATCTCACTCACCCGTCACAATAAGATACCCTCCAACGCTACCCGCCTACACTGCACCAGTGAGCGTCTACCGCACCGCTCGGACCATGGGTTGGAATGATACTATCAACATGAAATACAATCTAACGTGGTTGTTACCTATTGATCCCGGGTTCGATTACCTTGTTAGGCTCCATTTCTGCCAGATCCTACAGGAGATAACGCTGCAAAATCAGATGAGGTTTCATATCTATATCAACAATATGACGGCCGAGAGTGAAGCAGATCTCGTTTCGTGGACTGGTTCGAATGGGGTTCCAGCAATTAGAGACTACGTTGTGAATGTTAAAGAAGAAAATGAAGGGAAGCAGTCTCTATGGCTTGCACTACACCCTAACCCAGAGTCGAGCACCCGTGGAGCATTCTTAAACGGGCTGGAGATGTTCAAATTGAACGATAGTAATGGCAATCTTGCTGGTTTTAATCCTCCCAGACGCGAATCGGTGGTTGACTCAGCTACGCCTGGACCGTCTTCCCTGCGGTCGGAGACCCAAAAGAGAAATCGAACTCCAATCATCATTGGTGGAGGGGTGTTGGGTGGGTTCATCGTTGCACTCTCTCTTCTGTGTTTCTTTGTTTTCCGGCGCCGGAAGACAGTCAAGAACTCAGGCTCTGGCGATGGAACATCAAAATGGGCTCCATTCTCTCACACGTTGGGGTCCACGGAGACGAACACGCTTTCACTACCGTCTGATCTCTGCCACCACTTTTCGTTTGCTGAGATAAAAGCGGCCACCAACAACTTCCAAGGAGATTTGCTCGTAGGCGTAGGTGGTTTCGGTAGCGTCTACAAGGGCCTGATAGACGGTGGAGCCACCACCGTTGCGATCAAGCGAGCGAATCCGACGTCACGGCAAGGAGTCCATGAATTCCAAACGGAGATCGAGATGCTCTCAAAGCTTCGTCACCTCCACCTTGTCTCACTGATCGGGTACTGCCAGGAGGGCGCAGAGATGATCCTGGTCTATGACTACATGGCCCACGGCACTCTCCGTGATCATCTGTACAACACCAGTAAACCCCCTCTTCCGTGGAAGCAGAGGCTTATGATTTGCATCGGAGCAGCACGCGGTTTACACTACCTCCATACAGGAGCGAAGCACACGATTATCCACCGTGATGTGAAAACAACCAACATACTACTGGATGAGAAATGGGTGGCCAAGGTTTCAGATTTCGGGTTGTCAAAAATGGGGCCCACGACCCCGTCCCGCACCCACGTCAGCACTGTCGTCAAAGGTAGCTTCGGGTATTTGGACCCTGAGTACTTCAGGCGTAAGCAACTAACGGAGAAATCAGACGTATACTCGTTCGGTGTAGTATTGTTCGAGGTGTTGTGTGCAAGGCCAGCGCTGATTCCGTCGTTGGAGAAGGAGCAGGCGAGCTTGGCCGAGTGGGCCCGACACTGCAATCGGAGCGGGAGCCTACATCGGATAATTGACCCGTATCTTAGGGGGAAGATCGCTCCAGAATGTTTAAAACGGTTTGCCGAAATCGCTGAGAACTGCCTGGCTGATCAGGGGATTCAACGGCCAGCAATGGGCGACGTAGTGTGGAACCTTGAGTTTGCGTTGCAGCTGCAGGAGAAAGCAGAGGAGGATTGCAAGGATGGTAGGGCCCACAACGTAACAGATGATGAGGAGACCGCGTTAAACTCCTCCACCATACCAGCTGACGACGATGGCTTATTGTCGAGTTTCGGACCCGTTTCGAATTCGAAGTCAAAAAGCAGTGGTCCTGATAATTCCGAGAGATTGATGTCAGGCAATGTGTTCTCCGAGATCATGAACCAAAATGGACGATGA 2670 0.5011 MEKTRKDTCGTLSILIPPLYLFFFFFFLHLLISITADSSSYNPTDNIALDCGASSDTTTLEGRTWNADKGSKFFLLGQNDTSTISTAQEQGPSIPQVPYMTARIFRSQFTYSFPVTTGPKFVRLHFYPATYNGLDKSKSFFSVTVGRYTLLRNFSASLTASGLDVAYFREFSVNAEDQSLNITFAPSPNASDAYAFVNGIEIVSIPQNLYISDGHIRYLFNGQWIELSIDNETIALETVYRLNVGGNVISPQDDTGMFRSWYTDQQYTFGGDGVVPSHSPVTIRYPPTLPAYTAPVSVYRTARTMGWNDTINMKYNLTWLLPIDPGFDYLVRLHFCQILQEITLQNQMRFHIYINNMTAESEADLVSWTGSNGVPAIRDYVVNVKEENEGKQSLWLALHPNPESSTRGAFLNGLEMFKLNDSNGNLAGFNPPRRESVVDSATPGPSSLRSETQKRNRTPIIIGGGVLGGFIVALSLLCFFVFRRRKTVKNSGSGDGTSKWAPFSHTLGSTETNTLSLPSDLCHHFSFAEIKAATNNFQGDLLVGVGGFGSVYKGLIDGGATTVAIKRANPTSRQGVHEFQTEIEMLSKLRHLHLVSLIGYCQEGAEMILVYDYMAHGTLRDHLYNTSKPPLPWKQRLMICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKMGPTTPSRTHVSTVVKGSFGYLDPEYFRRKQLTEKSDVYSFGVVLFEVLCARPALIPSLEKEQASLAEWARHCNRSGSLHRIIDPYLRGKIAPECLKRFAEIAENCLADQGIQRPAMGDVVWNLEFALQLQEKAEEDCKDGRAHNVTDDEETALNSSTIPADDDGLLSSFGPVSNSKSKSSGPDNSERLMSGNVFSEIMNQNGR* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01309 889 FunFam Receptor-like protein kinase FERONIA 509 613 - -
Eupl04g01309 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Eupl04g01309 889 Gene3D Transferase(Phosphotransferase) domain 1 614 838 - -
Eupl04g01309 889 PANTHER OS03G0124300 PROTEIN-RELATED 20 489 IPR046957 GO:0004672
Eupl04g01309 889 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Eupl04g01309 889 FunFam Receptor-like protein kinase FERONIA 614 825 - -
Eupl04g01309 889 Gene3D - 46 205 - -
Eupl04g01309 889 Gene3D - 234 419 - -
Eupl04g01309 889 ProSitePatterns Protein kinases ATP-binding region signature. 543 566 IPR017441 GO:0005524
Eupl04g01309 889 FunFam FERONIA receptor-like kinase 234 420 - -
Eupl04g01309 889 SMART serkin_6 537 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01309 889 CDD STKc_IRAK 543 810 - -
Eupl04g01309 889 Pfam Malectin-like domain 49 418 IPR024788 -
Eupl04g01309 889 FunFam FERONIA receptor-like kinase 46 206 - -
Eupl04g01309 889 Gene3D Phosphorylase Kinase; domain 1 500 613 - -
Eupl04g01309 889 Pfam Protein tyrosine and serine/threonine kinase 543 807 IPR001245 GO:0004672|GO:0006468
Eupl04g01309 889 MobiDBLite consensus disorder prediction 835 889 - -
Eupl04g01309 889 ProSiteProfiles Protein kinase domain profile. 537 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01309 889 MobiDBLite consensus disorder prediction 822 889 - -
Eupl04g01309 889 MobiDBLite consensus disorder prediction 428 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01309 Eupl-Chr4 20227547 20230850 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01309 38 889 Receptor kinase-like Gene Family AT3G51550 58.068 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g01309 Malectin_like 3e-44 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01309 - - nnu:104588361 996.112