Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01307 ATGCGTCAGCAACTAACGGAGAAATCCGACGTGTACTCGTTCGGAGTGGTGTTATTCGAGGTGTTGTGCGCAAGGCCAGCGTTGATTCCGAAGTTGGAGAAAGAGCAGGCAAGCTTGGCCGAGTGGGCCCGACACTGCAATCGGAGCGGAACCCTTAATCGGATAATTGACCCATATCTAAGGGGTAAGATAGCTCCGGAATGTTTAAAACGGTTTGCAGAGATCGCTGAGAACTGCGTGGCTGAGCAGGGAATCGAACGGCCAGCAATGGGCGACGTGGTGTGGAACCTTGAGTTTGCGTTGCAGCTGCAGGAGAATGCAGTGGAGAATTGCAAGGGCGGTAGGGCCTACAACGTGACTGACGATGAGGAGACGCCGTTCAGCGACTCCTTCACCGTATCAACTGAAGATGATGACTTATTCTCAAGAATCGAAATTTCGGATTCAAGGAGCAGTGGAACAACTATGACGAGCGTTGGACAACGGAGCCTCCCCAGTGGTAGTGATGATTCCGAAAGGATGATTTCAAATGGACGGTGA 540 0.5167 MRQQLTEKSDVYSFGVVLFEVLCARPALIPKLEKEQASLAEWARHCNRSGTLNRIIDPYLRGKIAPECLKRFAEIAENCVAEQGIERPAMGDVVWNLEFALQLQENAVENCKGGRAYNVTDDEETPFSDSFTVSTEDDDLFSRIEISDSRSSGTTMTSVGQRSLPSGSDDSERMISNGR* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01307 179 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Eupl04g01307 179 MobiDBLite consensus disorder prediction 146 179 - -
Eupl04g01307 179 Pfam Protein tyrosine and serine/threonine kinase 3 96 IPR001245 GO:0004672|GO:0006468
Eupl04g01307 179 SUPERFAMILY Protein kinase-like (PK-like) 3 96 IPR011009 -
Eupl04g01307 179 PANTHER OS07G0166700 PROTEIN 2 104 IPR045272 GO:0004714|GO:0006468
Eupl04g01307 179 MobiDBLite consensus disorder prediction 142 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01307 Eupl-Chr4 20210837 20211376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01307 2 174 Receptor kinase-like Gene Family AT3G51550 59.429 3.80e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g01307 PK_Tyr_Ser-Thr 4.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01307 - - nnu:104588361 210.305