Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01306 ATGTTTGATTCCATGGAGAACACCAACAAACACACTTTACACCTCACCATGTTTTCCCCTCTCCACCTCTTCTTCTTCTTCCATCTACTTTTCTCCATCACCGCTGCCAATAACTCGCCATTCGTTCCATCTGATATCATTTTCCTCGACTGCGGTTCCTCTTCAGACACTCCACTACTTGAGGGTCGGAATTGGACAGCCGACTCCGGAACAAAGTTTATGTTGTCAGGCCAAGACAACACATCAACAACAGCCATTGCAAAAGCCCAAGGCTCTGCCCCGCAAGTCCCTTACATGACTGCTCGTATCTTTCGCTCTCAATTTACCTACTCATTCCCCGTCTCCTCCGCTGGCCCAAAATTCATCCGTCTCTACTTCTATTCTGCTTCCTACTCCGATCTTAACATATCTAATGCCTCCTTCTCCGTCACCGTGGGTCGCTACACCCTCCTAAGTAACTTCAGCGCCTCCCTCACTGCTGATGATCTCGGCGAAGCATACTTCCCTAGAGAATTCTCATTCAACGCAGAGGAGAACCAGAGCTTAGATGTAACGTTCACACCATCTCCGAATACATCCGACTCCTTTGCTTTTGTGAACGGAATTGAGATTGTTTCGATGCCCTCGAATCTGTACACTCGCGGGGTAGACCTCCCCTTCTTGTTTGCCCAACAGACGATTCAGTTCTCCAAACATAACGAAACAACAGCCATGGAGACAGTTTACCGACTAAACGTCGGGGGGAACCTTATCTCACCTGTATATGATACTGGCATGTTTCGGACCTGGGAAATTGACCAACAGTACGTAGTATCAACGTCTAAAGGCGTAGAGCCGCCTAATTGGAACACTACAATCAGTTACTCAGCCGCAGTACCTGCCTACACTGCACCGGAAGGGGTCTACATTACGTCCAGGACGATGAGTCTCGATAAGACGTTTAACACAAACAACAATCTAACATGGTATTTACCTGTTGATACTGGCTTCAATTACCTGGTTAGGCTCCATTTCTGCGAGTACCAATTGGAGATAACGAAGCCTTTTCAAAGGGTGTTTTTTATCTTTATCAACAATCTGACGGCCGAGAGTGAAGCCGATGTCATCTCATGGAGTGGGGGGAATGGAGTTCCAGTGTTTAAAGACTACGTTGTGAATGTTCCAGAAGGAAGCGGGGGAAAGCAGGGCCTATGGATCGCACTACACCCTGTCTCAGAATCAAATACGAAGTACTCAAGCGCAATCTTAAACGGGCTGGAGATCTTCAAATTGAGTAGTGATGAAGGCAATCTCGCTGGACCCAATCCTCCCCCGAAAGTGGGCCTGTCTCCGCCTGGCCCTGAACTGTCATCCCGTCCATCAAAGAATTCGAAGAAGAATCGAACTCCAGTCATCATTGCCGGAAGTGTGGTATGTGGGTTCGTTGCACTATCTGCTCTGTGTTTCTTTGTTTTCCGGTGCCGGGGGAGAGTGAAAGACACCGCTGGCGGTGCAGGGGACAAGAAATCTCGGAGATTCCTGCACTCTCACTCCGTCGTATCCACAAAAACGACCACGTCTTCACTACCGTCCGATATCTGCCGCCACTTCTCGCTTGCCGAGATCAAAGCGGCGACCAACAACTTCGACGAATCTTTGTTCATCGGCATCGGCGGCTTCGGTAGCGTCTACAAGGGCCATATAGACGGTGGTGATGGAACATCCATCACCACCACAGTTGCGATAAAGCGAGGGAAACCGACATCACAACAAGGGATCAAAGAGTTCCATACGGAGATCAAGATGCTCTCAAAACTCCGTCACCTCCACCTTGTCTCTTTGATCGGGTACTGCGAGGAGGACGGAGAGATGATCCTGGTCTACGACTACATGGCCCACGGCACTCTCCGTGATCATCTCTACAACACCAGTAATCCCCCTCTTCCGTGGAAGCGGAGGCTTGAGATTTGCATTGGAGCAGCACGCGGCTTACACTATCTCCATACAGGAGCGGAGTACATGATCATCCACCGTGACGTGAAGACAACCAACATACTATTGAATGAGAAATGGGTGGCCATTGGCCAAGGTTTCAGATTTCGGTTTGTCGAAGATTGGACCCCACGACCCTGTCCCACACCCACGTCAGCACTTTGGTCAAAGGTAGCTTCGGGTATTTAG 2160 0.494 MFDSMENTNKHTLHLTMFSPLHLFFFFHLLFSITAANNSPFVPSDIIFLDCGSSSDTPLLEGRNWTADSGTKFMLSGQDNTSTTAIAKAQGSAPQVPYMTARIFRSQFTYSFPVSSAGPKFIRLYFYSASYSDLNISNASFSVTVGRYTLLSNFSASLTADDLGEAYFPREFSFNAEENQSLDVTFTPSPNTSDSFAFVNGIEIVSMPSNLYTRGVDLPFLFAQQTIQFSKHNETTAMETVYRLNVGGNLISPVYDTGMFRTWEIDQQYVVSTSKGVEPPNWNTTISYSAAVPAYTAPEGVYITSRTMSLDKTFNTNNNLTWYLPVDTGFNYLVRLHFCEYQLEITKPFQRVFFIFINNLTAESEADVISWSGGNGVPVFKDYVVNVPEGSGGKQGLWIALHPVSESNTKYSSAILNGLEIFKLSSDEGNLAGPNPPPKVGLSPPGPELSSRPSKNSKKNRTPVIIAGSVVCGFVALSALCFFVFRCRGRVKDTAGGAGDKKSRRFLHSHSVVSTKTTTSSLPSDICRHFSLAEIKAATNNFDESLFIGIGGFGSVYKGHIDGGDGTSITTTVAIKRGKPTSQQGIKEFHTEIKMLSKLRHLHLVSLIGYCEEDGEMILVYDYMAHGTLRDHLYNTSNPPLPWKRRLEICIGAARGLHYLHTGAEYMIIHRDVKTTNILLNEKWVAIGQGFRFRFVEDWTPRPCPTPTSALWSKVASGI* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01306 719 Pfam Protein tyrosine and serine/threonine kinase 548 683 IPR001245 GO:0004672|GO:0006468
Eupl04g01306 719 Pfam Malectin-like domain 49 423 IPR024788 -
Eupl04g01306 719 SMART serkin_6 542 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01306 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Eupl04g01306 719 SUPERFAMILY Protein kinase-like (PK-like) 518 686 IPR011009 -
Eupl04g01306 719 PANTHER OS03G0124300 PROTEIN-RELATED 20 491 IPR046957 GO:0004672
Eupl04g01306 719 Gene3D Phosphorylase Kinase; domain 1 503 623 - -
Eupl04g01306 719 FunFam Receptor-like protein kinase FERONIA 514 623 - -
Eupl04g01306 719 ProSiteProfiles Protein kinase domain profile. 542 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01306 719 ProSitePatterns Protein kinases ATP-binding region signature. 548 576 IPR017441 GO:0005524
Eupl04g01306 719 Gene3D Transferase(Phosphotransferase) domain 1 624 693 - -
Eupl04g01306 719 FunFam FERONIA receptor-like kinase 236 425 - -
Eupl04g01306 719 FunFam FERONIA receptor-like kinase 46 208 - -
Eupl04g01306 719 MobiDBLite consensus disorder prediction 433 459 - -
Eupl04g01306 719 Gene3D - 45 208 - -
Eupl04g01306 719 Gene3D - 236 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01306 Eupl-Chr4 20208663 20210822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01306 33 686 Receptor kinase-like Gene Family AT3G51550 52.530 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g01306 Malectin_like 3.3e-44 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01306 - - msin:131253646 674.085