Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01304 ATGTCATCGGAATACCACCTTTTGTTCTTCCCGAAAACTGCCTCTTCGCCTGCTCTCAGCTTTGAACTCCTTGCCTGTGCTTTGCTTCTCGTAGCCATCTTTGGTTTCTGGCTTGCACCTGGTGGGCTTGCTTGGGCTCTTTCCAAAGCTCAAGCCCAAGCCCAGGCTAAAACCGCCATTCCGGGCCCATCAGGCTTCCCTCTCGTGGGCCTACTCTTCGCCTTCACTGGCTCCACGGCCCATCGCGTGCTTGCCAAGCTTGCCCGAACCTCGAACGCCGTACCTCTAATGGCGTTCTCTGTTGGCTTCACTCGTTTCATCATTTCAAGCCACCCAAACACAGCTAAAGAGATTCTGAATAGTTCGGCTTTCGCTGATCGACCCGTTAAGGAATCCGCTTACGAGCTTCTCTTCCACCGAGCAATGGGTTTCGCTCCTTTCGGAGAGTATTGGAGGAATCTGAGGAGAATCTCAGCTACCCATTTGTTCAGTCCGAAGAGAATCGCTGGTTTCGCATCCTTTCGGAGCGAAATCGGAGCAAAAATGATAAATGAGATTAGGGTTTTGATGGAGTCGAAAGGGACGGTTGAAGTGAAAAAAGTTTTGCATTTTGGGTCACTGAACAATGTGATGATGAGCGTTTTTGGGAGGAGTTATGATTTTAAGGAAGGTGGGGAAGCTGGGTTTCAGCTTGAAGAGTTGGTGAGTGAAGGGTATGAGTTGCTTGGGATTTTCAACTGGAGTGATCACTTTCCTGTTCTGGGGTGGTTGGATTTGCAAGGAGTAAGGAAAAGATGCAGAAAGTTGGTTGCTAAAGTGAACGTTTTTGTTGAGAAGATCATAGAGGAGCATAGGAGGAGGAGGGTTATTGGAGTCTTGGTTGCTGAGAGTGTTAAAGATTTCGTTGATGTCTTGCTGGACTTGGAGGAGGAGAACAGCCTCAGCGACTCTGATATGATCGCCGTTCTCTGGGAAATGATCTTCAGAGGGACTGATACAGTAGCAATACTTTTGGAATGGATTCTTGCAAGAATGGTCCTACACCCAGACATCCAATCCAAAGCCCAATCAGAAATTGATGCTGTGATTGGGAACACCAGACTGGTATCAGATTCCGACTTGCCCAACCTCCCTTATCTACAAGCCATAGTGAAGGAATCACTCCGAATGCACCCTCCAGGTCCCCTCCTCTCATGGGCCCGACTTGCCGTCCACGATGTCCATATCGGAAAGAATTTCATACCAGCTGGAACAACAGCAATGGTGAACATGTGGGCGATAACCCACGATGATCGGGTATGGTCGGAGCCGAACGTATTTAAACCGGAGCGATTTATCGATGAAGATGTGAGCATTATGGGATCCGATCTCCGGTTGGCGCCTTTCGGATCGGGGAGGAGAGTATGTCCTGGGAAGGCAATGGGTTTGGCTACTGTTCATCTCTGGTTGGCTCAGTTGCTTCAGAGCTTCAATTGGGTTGTTGCTTCTGATAATGGTGTGGACTTGTCTGAGTGCCTCAAATTGTCTCTTGAGATGAAGAAGTCTTTGATCTGCAAAGCTGTTCCAAGGGTTGCTTGA 1578 0.4867 MSSEYHLLFFPKTASSPALSFELLACALLLVAIFGFWLAPGGLAWALSKAQAQAQAKTAIPGPSGFPLVGLLFAFTGSTAHRVLAKLARTSNAVPLMAFSVGFTRFIISSHPNTAKEILNSSAFADRPVKESAYELLFHRAMGFAPFGEYWRNLRRISATHLFSPKRIAGFASFRSEIGAKMINEIRVLMESKGTVEVKKVLHFGSLNNVMMSVFGRSYDFKEGGEAGFQLEELVSEGYELLGIFNWSDHFPVLGWLDLQGVRKRCRKLVAKVNVFVEKIIEEHRRRRVIGVLVAESVKDFVDVLLDLEEENSLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQSKAQSEIDAVIGNTRLVSDSDLPNLPYLQAIVKESLRMHPPGPLLSWARLAVHDVHIGKNFIPAGTTAMVNMWAITHDDRVWSEPNVFKPERFIDEDVSIMGSDLRLAPFGSGRRVCPGKAMGLATVHLWLAQLLQSFNWVVASDNGVDLSECLKLSLEMKKSLICKAVPRVA* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01304 525 Pfam Cytochrome P450 61 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 Gene3D Cytochrome P450 46 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 FunFam Cytochrome P450 78A5 52 523 - -
Eupl04g01304 525 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 CDD CYP78 92 516 - -
Eupl04g01304 525 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01304 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Eupl04g01304 525 PANTHER CYTOCHROME P450 78A7-RELATED 14 523 - -
Eupl04g01304 525 SUPERFAMILY Cytochrome P450 60 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01304 Eupl-Chr4 20130217 20132771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01304 1 523 Cytochrome P450 AT1G74110 65.428 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01304 K20619 - nnu:104597909 825.083