Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01302 ATGGCGATTAGGGTTCTAACAAGATTCACTTTTCATCGCTTAATTATGAATTATCAGCAAATCCCAACTTGCCCAAATAAAAAAATTCGATCTTTTTCGCGAACTTCTATTCTTCCAAACAAAATCTCTCCGGAATTTGCAGACAGATCTCAGTACAGACAACTAATTTCTCTTGCAAATCTCTTGCAGAGGTATGGTTTTCCACCATCTCATCTACATGATTTTCTGGGAAAGAATCGATTTTTATTGAATTTCAGTTTGGTAGATGTGGAGAAGTGTCTAGGCGTTCTCTTATCGCTCAGGTTATCGCAGAAATCGATTGTATCGATCTTGTCTGCTTGCCCTGGGGTTCTGGAATTAGGGTTTCTAAAGAAATGGGAAATGGGATTTTCACGATTAGAATTTTCTACTGTTTCTCCAATGCTAATTCAGAGCGTTCTCGAACACTGTAGAAGGTTCCAGATAGAGCCTACTGATCTATCAAAGAGTTTACGGGTTTTGAAAGACTTGGGTTTTAGCAATGAGACTGTCACTAGGGTTTTAGAGGACTTCCCAAGAGTAATCACAGTGAAAGCGCACGATATTGACTGCAAGATCGGATTCTTTAAGGGAATTGGGTTTCAACGGAATGAAATCGATCGAATCTGCTATATGTTTCCGGGCATTTTAGGATTTGGTATTGAAAATAGGTTGAAGCCACTATTTAACGAGTTTCAAGGTTTGGGTTTCACTGTGGATGAGGTTAGAAGGGAGGTCATCAAAGACCCACAAATTCTGAGTATGGAAGCAGGGGAGCTCTCTCGATGTCTGGAACTTCTGAGGGATTTGAAATGTCGGTTAGCAATTAAGGAGAAGATTCAAAATAAGGGGACTTTTAGAGCTGGATTTGAAGTAAAACTGAGAGTAGATTGTCTATGCAGACATGGGTTGATCCGCAGAGAAGCCTTTAAGGTCTTGCAGAGAGAGCCAAGGTCAATTAGATACGAAATAGAGGACATAGAGAAGAAGATTGAGTTTCTAGTACACAGAATGGGGTTTAAAATCGGTTGCCTGATTGAAGTTCCAGAGTATTTAGGTGTGAATTTTGAAAAACAGATTGTTCCTCGATACAATGTCATCGATTATCTGGGATCAAAAGGTGGGCTTGGTTGTGAGGTGGGGTTGAAGGGTCTGATAAAGCCCAGTAGGCTTAGGTTCTACAATCTCTATGTCAAGCCATATCCAGAGTGTGAAAAGATCTTTGGGAGATTCCCAAGAGATACCAAAGTTAAAACCCAACATCCGGTTGGACTGTGGAAGCTGTTCAATCCGCAGAGCTACCCAGAGTCCAAAGAGGATTTGAGAAATATTAAGTTGTTCATGGAATGTCTGGTTTAA 1377 0.4045 MAIRVLTRFTFHRLIMNYQQIPTCPNKKIRSFSRTSILPNKISPEFADRSQYRQLISLANLLQRYGFPPSHLHDFLGKNRFLLNFSLVDVEKCLGVLLSLRLSQKSIVSILSACPGVLELGFLKKWEMGFSRLEFSTVSPMLIQSVLEHCRRFQIEPTDLSKSLRVLKDLGFSNETVTRVLEDFPRVITVKAHDIDCKIGFFKGIGFQRNEIDRICYMFPGILGFGIENRLKPLFNEFQGLGFTVDEVRREVIKDPQILSMEAGELSRCLELLRDLKCRLAIKEKIQNKGTFRAGFEVKLRVDCLCRHGLIRREAFKVLQREPRSIRYEIEDIEKKIEFLVHRMGFKIGCLIEVPEYLGVNFEKQIVPRYNVIDYLGSKGGLGCEVGLKGLIKPSRLRFYNLYVKPYPECEKIFGRFPRDTKVKTQHPVGLWKLFNPQSYPESKEDLRNIKLFMECLV* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01302 458 PANTHER CGI-12 PROTEIN-RELATED 60 407 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 SMART mt_12 213 244 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 SMART mt_12 178 208 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 SMART mt_12 143 173 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 SMART mt_12 249 279 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 SMART mt_12 348 382 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 Gene3D Transcription termination factor 3, mitochondrial 144 417 IPR038538 -
Eupl04g01302 458 Pfam mTERF 301 376 IPR003690 GO:0003690|GO:0006355
Eupl04g01302 458 Pfam mTERF 154 272 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl04g01302 mTERF 9.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01302 - - nnu:104597913 631.328