Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01295 ATGTATGGGCAAGGGAACCATGCTCCTCAGTTCAGACATGGTCCTCCGACACTATTGCCTCCATTCCAGCAAGGCCCTCCTGCTCATCACCCCCCTCCTTTCCAACAACCCCCTCCCGCTCCACCACCTCCTGTAATTCGGCAAGTCCCTTCAGCTGCACCTCCTCATGTAGTTCAGTCTGGGTCCGCCATATATCAGCACGGCCCACCTCCCCCACCCCCACCCCCTCCAGTTCAGCAAGGTGGACCTCCACCACTGCCTCAGTCTATTCGAGTTCCAGCCCCTGTAATATCAAACATGGGTCAATCCTACTTACATCCACCGCCATCAGTCCACGGGAGTTCCCCAGTGCCATCTTCCTATCCAACTACCCAACAGAATGCCCAATATCTTTCACCCATACCTCCTGGCCCACCTCTTGCTGGACCAAGCCACCCAGAGATGATCCGGGCCCCACTTCCTCCTAGGGTGTTCCCTCCACCTCCTTCCCAAAGACAAATGCTGTATAGAACTCCTCTTCATCTTCCACCACCTGGTATTGGGCAAGGTTTTCAACATGGACAGCTGCTGCCTCCACCACCACCTTCTAGTTTCGTGCCAGTCACGCCTGCTCCTTTTGCATCTTATGTACATACCTCGGTTGAAGATGCTCATCCGCCTTCTATGCCACTGCAACCGCCACCACCTCCACCCTCTTCTCCCCCACCCCTTCCACCATCACCACCTCCACCTGCCTCTCCAACAGATCTTTCAGTTGGATCTTTTACAACATCATCTATTATGCCCACTTCTTCCGGTTTGCCCCACCATTCAGAGTCTGGTTGTGGTACTGATAAACTTTCTGATTCTATGGAGAAGGTTAGTTTTTCTGTTGATAAAGCAGTGGGCCCTTCCCAAATCACCAATGATGAAGATGGGTTATCGAAAAAACAACCATTTGTGGCTCTTCCTTCTCCACCTAAACCAGCTGACGAGGAAATTATTCGGAAAATTGAAGTTTTGTGCCAGTTCATTGCTAAGAATGGGCCTGATTTCGAAGATATAGCTCGTGAAAAAGAATATGGGAATCCAAAATTTGCATTTTTGATTGGGGGTGAACCCGGAAGTGAAGCTGCAATTGCGTATGAATATTATCAGTGGACGAAAAGGAAATATCATATGGAATCCAAGTTCCATAATGGGTCTGAGCAAAGTGATTCATTGGTGAGGCCTTTGGAAATTGGGTCTTCGACACAGCCCAATAATTTGATAGACGAAGATGCATCTCATTCACCAGCAGATTCTGACATGGATATGGAAGTTGATGTGAACCAGTCAGACAAAGACCAGGGGATTACTGACTCAATTGAAGGTCTAAGCAATCCTGTTTCAATGTGTAATGAGGTCCTTACTGTGAAAGAGCAACTTCATGCAGCTCAGTGTTCAACAGAATGCCCAACGTCTGGGAATGCATTATCTAGAATTGTATCAAGTTCTGAGTCCTCGGTATTGGCCAAGGAAGAAAGAGACCATGATCAATCCACATTTGGAAGGCCATTTGCCAAAGATCATAGACCAGTTATGAGTTCAGCTGGAGCTGCTGAATGCACCTTAGAGAGCAGCATACAGAAATTCACTAGGCCTCTCATTGAAGATTTAAGTCCATCCAGGGATTCAGCAGCTGCTGTGTCCATCAGCCCTAAGGAGGTTCCAGGTCCACCTATCAAAGTTGGAAGCCCTTTCAGACTTATACAAGATTATGCCTCTGATGATAGTGCAGAAGATGATGACGGGCCGTCTTTTGAAGATGTCAGCCCTGTGAGGGTCCCGCCCTCGATTACAGTGTGTAACACATATTTGCAAGAAGACGAGGAGGCCAAGTTGGATATAGATGTACACTCCAAGAATGTTTCTGCAACTGAAAAGGGATTTTTGTCACTCACTGAGTCAGGTTTGGTACATCCTACTAGCGTACCATATAGGATGTCAGATATTTCCCCAGAATCACGCAAAGTCGGGGAGGCAACTGGTGTAATTTCTGGTCCATTAGATGCAATTGCTAAAACGGATGAGCTACATAATAAAAGTTATGGAGATCAAAGATCTAATAATCAGGAGCACAAGGGTACTTTGGTAGCTAATGTTGTTGATATTGATCCTCAGAGTAGTAAGTTTCAGAAGGATGATGCACAGCAGGCTTCCACTGCAATGAAAGTTGATGAGTTTGGGAGATTGGTAAAAGAAGGTGCCAGTGACAGTGACTCTGATGGGGCACGCTATACTAGGGGGCCTTCTAGGAGAGGCAAAAGCTGGAGCAGGAGCCGGAGCCGGAGCCGATCTCCCCAAGATAGATGGAGAAGGAGGAGTCGCAGTCCATGGAGGAGAAAGGAGAAGCGAAGCCGTTCTCGCAGCTGGTCTCCCAAGAAACAGAGGAACAGGAGCAGGTCTCCACCTGCTTTCAGGCACACAGGTGAGTCCAGTGGTGAGAAAATAAGGCGAGATAGAGGTCAGATTCCAGATTGCTTTGACTTCCTTCGAGGCAGATGCTACCGTGGAGCATCTTGTCGGTTTCTGCACCGTGAGTCAGCCAGTGGTGATGCAACAAGACGCTATAGGAGTAGACAACAGCGGCATTTGGAAGTTTCACAGGATTTGAGTAACTCTGTTGTCGGTGGAGATTCTCATTTTGCTGTGGAGACCCAAGAGGTCAATGATGTACCAGCAAAAATGTTGGTCGATGAACATGATACCTTTCTGAAGGAGGAAGCCAAGAGCCAGGAGATTCCCTGCCGGGATTTGTCTGTGAGCAGCACTGATATACCAAAAGATGGAGAATTGGATGAGAAGGCAGTATTAGGTCCTGTAAGAGATGATGTGCAACCTGTTATTTCAAGTGAAGCTGGTCAATCACCAGTTACTCATATTGATGAAGTGGGTCAATCTGATTCTCAAGAGGCAATTGTTCAGGGGCTGGAAACCCAGCAAGTTCAACAACTGCAGGAGGAACCTGCTGTTCACTTTCAAGAGAATGGGATTTCTAAGCAGCCAGCAGAGACCGTCCAGCCTTCGCTGGCTGGTAGCTTCCCAAATCAACCTACAACTGATGCTGAAATCCAACATTTGCCTGAAACTCCTGCAGGTGAACCTTCCTCGAGGCAAAATTTAGTGATTCAGCCATCCCAAGCCAGTCTTCCCATTGCTCAGCCATCCCAACCTGATGGTTCTGTTTCCCTTTCTCAGTCTTTACCTCCTCAGACATCCACAACTTTGCCAGATCATCTTACCATTAGTGATTCGTATCCTGAGAAGGTCCCTTCAGCTCTGCCTTATCCAATTCCAACTTCTATGAGCCAACCAGGTCTGAATCAGGTTGCTTCAAACCACCCTTTCCCACCTGAGATTTTTGCCCCTCAATCTCTGTCTCCTAAAGAGTTCCGCCCACCAAACTTTTCAGCTGGAGACTTTCGGTATCAACTTTCCCAGCTACCCCTCCCACCTCCTTTTCCTCAAGATGTTAATGCACCACATGCATCACATCCGTCGAAAGATTACAACTTGCCACCTGTATCTGCAAATGTCCATTCTCAGTCTGCCCCAGTGGAAAGGCTTCCTCCCTATCAGGTTCCATTACACAACCAGCATTCTCAATACCCAGCTCCATCAAAACCCTCTTGGACCTCCCTGCCCCCACCACCTTCATATGTGAATGAATTAACTTCAACTTCCGTCATGCACACCCCTGGTTTTCATCCGTCGGAGTTTCAGCAGAATCTTATGCCACCACGGAATGACTTCCCTCAGCCTTTGATGAGGTCCTACCCACATGAAGAGCCGACTCACTCTCAAGCTGTTGACTTTCATCCTCGACCTTTCCCTCCAATGGAGGAACCCCATCGGCCCCCCTTTCATGTGGAAGATTTCAGACTAAAGCCTCCGCCCATGGACAACATGCGGGGTCAACCATTGGGAGGCCCCAACTTCATCAGAGACAAGCAATATACACGTTCTTCAATGCCTGAAGGCAATCAGTTTCACCCTGGACCTCAGCATGATTACCGTTTGCATCCTCAGCCTCAGCTTCGAGAAGAACACCATCTCTCCCTTCAGCTCCAAGATGATATACAAAATTTCCAACCATTACCAAACCGAAGGTTTACTTCCCAGTTTCCAGTTCAAGATTTTACAGCTTCTGGTTCCTTTGGACAGGACAACATGCGCTCTCAGCCAGTACCTTTTCAGAAGGAATCTCCCGCAGAGCAAATGCAGTCTTTCCCAGATGGCAATCTACTTCCCAGATCCTTCTCAAGGGAAGATTTTGGTACCCCTTCTACAGGGAATCTCTCTTACACGCAGCAGCAACAGTCATCCTTTGGCTCACAACGCTCTATGGCGGATAGTTTTCCTTCTCATTTAGGTGCACCTGGAAAGGTTGATCCATCGATGTCAAGATACCCATCAAGCTTTTTGGGCAGCAATAAGCTGTCTCACTTGTCAGATGCTGCAGGATCTAAAATTTCAAATTCAACCCACTATAATCCATTTGCATCTACTTTTGAACAGCCACCTGGAAGCTCCAAATTTAATTCTAGTTTCAGTCGAGAAATTGACACAAACTACAGTAGTAAATATGGTTCTTCTTTTGGTCTGAGCGATGACTCAGCAAGTGGGCAAGGCATTGGTAATCTTGGATCAAGACAGATGGTCTTACCACCAGATTCTAGCATGTCTGGAGGGCAGATTTTGCTTAGGTCGGGTGGTTCATTGCTGACTGCCCCATCAGGAGAGTTGAATGATCACACACAGCCAAGGGAGCCTTCTGTGGAAGGCTTTCCAGGTACCCAGCCTCAGTTTGTGAGGGGATCAATTGCCGGTGACCAGTATGACCCACTGTTTGACAGCATTGAGCCATCTTCAAATACATTCAGGAAGCTTGATCATGTTCAAGAACGAGACCCCACCGGTGATATCATTAAAAGGTCCGTCGTTGCTCAAGTGACCAATGACTCGGTCATCATGTTGAGACTCGGCAGCTCACATAGACCTGTGGACACAGAAGAGAACAATATGCAGAAAGGGGGTGCAGTTGTTGCAATTACATCGCCAGAAAATGATGAGTTTGGTGAGACAGCAATAGATGCAGAAGTCGGTGCTGTGGAGAATGGAAGCCCTCAGCCAGTGGAAAGAAAGGACTGGAGCCCAAGCAATCCAATTGATCTAGGAAACACAGCCACAGGAGAGATTGAGATTGATCAGGTTCAGACCACTGGGAAGAGCAAGAAGAGCAAGGATTCCCGATCAATGAAGCTTTTCAAGATTGCCCTTGCAGATTTTGTGAAGGAGGTTCTAAAGCCATCATGGCGACAGGGTAACATGAGCAAGGAAGCATTCAAGACCATTGTCAAGAAAACTGTTGATAAGGTATCCGGAGCTATGAAGAACCACCAGATACCCAAGACACAGGCAAAAATAGATCAATATGTTGAGTCGTCACAACGAAAACTGACCAAACTTGTGATGGGCTATGTGGACAAGTATGTCAAAGCGTAA 5526 0.4743 MYGQGNHAPQFRHGPPTLLPPFQQGPPAHHPPPFQQPPPAPPPPVIRQVPSAAPPHVVQSGSAIYQHGPPPPPPPPPVQQGGPPPLPQSIRVPAPVISNMGQSYLHPPPSVHGSSPVPSSYPTTQQNAQYLSPIPPGPPLAGPSHPEMIRAPLPPRVFPPPPSQRQMLYRTPLHLPPPGIGQGFQHGQLLPPPPPSSFVPVTPAPFASYVHTSVEDAHPPSMPLQPPPPPPSSPPPLPPSPPPPASPTDLSVGSFTTSSIMPTSSGLPHHSESGCGTDKLSDSMEKVSFSVDKAVGPSQITNDEDGLSKKQPFVALPSPPKPADEEIIRKIEVLCQFIAKNGPDFEDIAREKEYGNPKFAFLIGGEPGSEAAIAYEYYQWTKRKYHMESKFHNGSEQSDSLVRPLEIGSSTQPNNLIDEDASHSPADSDMDMEVDVNQSDKDQGITDSIEGLSNPVSMCNEVLTVKEQLHAAQCSTECPTSGNALSRIVSSSESSVLAKEERDHDQSTFGRPFAKDHRPVMSSAGAAECTLESSIQKFTRPLIEDLSPSRDSAAAVSISPKEVPGPPIKVGSPFRLIQDYASDDSAEDDDGPSFEDVSPVRVPPSITVCNTYLQEDEEAKLDIDVHSKNVSATEKGFLSLTESGLVHPTSVPYRMSDISPESRKVGEATGVISGPLDAIAKTDELHNKSYGDQRSNNQEHKGTLVANVVDIDPQSSKFQKDDAQQASTAMKVDEFGRLVKEGASDSDSDGARYTRGPSRRGKSWSRSRSRSRSPQDRWRRRSRSPWRRKEKRSRSRSWSPKKQRNRSRSPPAFRHTGESSGEKIRRDRGQIPDCFDFLRGRCYRGASCRFLHRESASGDATRRYRSRQQRHLEVSQDLSNSVVGGDSHFAVETQEVNDVPAKMLVDEHDTFLKEEAKSQEIPCRDLSVSSTDIPKDGELDEKAVLGPVRDDVQPVISSEAGQSPVTHIDEVGQSDSQEAIVQGLETQQVQQLQEEPAVHFQENGISKQPAETVQPSLAGSFPNQPTTDAEIQHLPETPAGEPSSRQNLVIQPSQASLPIAQPSQPDGSVSLSQSLPPQTSTTLPDHLTISDSYPEKVPSALPYPIPTSMSQPGLNQVASNHPFPPEIFAPQSLSPKEFRPPNFSAGDFRYQLSQLPLPPPFPQDVNAPHASHPSKDYNLPPVSANVHSQSAPVERLPPYQVPLHNQHSQYPAPSKPSWTSLPPPPSYVNELTSTSVMHTPGFHPSEFQQNLMPPRNDFPQPLMRSYPHEEPTHSQAVDFHPRPFPPMEEPHRPPFHVEDFRLKPPPMDNMRGQPLGGPNFIRDKQYTRSSMPEGNQFHPGPQHDYRLHPQPQLREEHHLSLQLQDDIQNFQPLPNRRFTSQFPVQDFTASGSFGQDNMRSQPVPFQKESPAEQMQSFPDGNLLPRSFSREDFGTPSTGNLSYTQQQQSSFGSQRSMADSFPSHLGAPGKVDPSMSRYPSSFLGSNKLSHLSDAAGSKISNSTHYNPFASTFEQPPGSSKFNSSFSREIDTNYSSKYGSSFGLSDDSASGQGIGNLGSRQMVLPPDSSMSGGQILLRSGGSLLTAPSGELNDHTQPREPSVEGFPGTQPQFVRGSIAGDQYDPLFDSIEPSSNTFRKLDHVQERDPTGDIIKRSVVAQVTNDSVIMLRLGSSHRPVDTEENNMQKGGAVVAITSPENDEFGETAIDAEVGAVENGSPQPVERKDWSPSNPIDLGNTATGEIEIDQVQTTGKSKKSKDSRSMKLFKIALADFVKEVLKPSWRQGNMSKEAFKTIVKKTVDKVSGAMKNHQIPKTQAKIDQYVESSQRKLTKLVMGYVDKYVKA* 1842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01295 1841 SUPERFAMILY Surp module (SWAP domain) 311 384 IPR035967 GO:0003723|GO:0006396
Eupl04g01295 1841 ProSiteProfiles SURP motif repeat profile. 330 378 IPR000061 GO:0003723|GO:0006396
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1430 1459 - -
Eupl04g01295 1841 Gene3D - 800 871 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1388 1476 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 739 756 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1388 1422 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1058 1095 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 220 248 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 249 271 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1713 1735 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 394 421 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 66 91 - -
Eupl04g01295 1841 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1334 1840 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1004 1046 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 116 131 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 496 512 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 14 50 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1058 1088 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1 322 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 394 431 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1005 1031 - -
Eupl04g01295 1841 Pfam Surp module 331 363 IPR000061 GO:0003723|GO:0006396
Eupl04g01295 1841 Gene3D Surp module 316 390 IPR035967 GO:0003723|GO:0006396
Eupl04g01295 1841 ProSiteProfiles Zinc finger C3H1-type profile. 828 855 IPR000571 GO:0046872
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1577 1607 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 1154 1185 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 759 809 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 495 520 - -
Eupl04g01295 1841 SMART c3hfinal6 828 854 IPR000571 GO:0046872
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 132 166 - -
Eupl04g01295 1841 MobiDBLite consensus disorder prediction 739 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01295 Eupl-Chr4 20009085 20019699 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl04g01295 Surp 2.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01295 - - nnu:104597922 1514.21