Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01288 ATGATTTCCAATTCAAGAGAAAAAGATATTCCAGCGAAGCAGGAAGGCAAAACCAACGATGGAAAGATCACTAAGGGCTCATCTAGTTCAAGACCATGGCAAGGGCTAAAGGATCCACGGGTTGTACGTGTTTCGCGTTCCTTTGGAGGAAAAGATAGGCATAGCAAAGTTTGCACAATAAGAGGATTGAGAGACAGGCGTGTTAGGCTTTCGGTACCCACCGCTATTCAGTTGTATGACCTTCAAGATAGGCTTGGGCTTAACCAACCTAGCAAAGTCGTCGATTGGCTGCTTAATGTTGCTAAACATGAAATTGATGAACTTCCTCCACTCCAAATGCCACCAAACTTCAGTCAGTACCCACAATCTATGATAGTTTCTCATGAAGTGAATGCACTGCAATCAGCTTCCATCGCTTCCGTTGTAGATGCAAATTTAGATTATGTAAAGGAAGATGGATCACAGTCTTTACCCTCTAGTAAGGGAGGGTTTAATATCAATGACAACATTGTCGAGGAAGATCAAACAACAGTGCCCAAATCTATATATTGGAATTATAATGCTCCTTCGAGGTCAAAATGTAAAGAAGTTGCAAGAGAAACAATCGCCGAGAAAAGCAATTGGATCAAAAGAGATGAACAAGAAGGCCAAGAAAGTATTGAAGCTCATAATCTACAAGTATCATCTCACAATCCTCTTCCTAGAGCTACCAATTCTTCCCTTCCAGGTTTGCTAAACAATGTCATGCCATACAATTCCTACTATCACTGGGATCATTCAAATTTATCTTTATCTCATTTAGGAAGCCATGGATATTCATCCCAAATGGAAGATCCCCATAACTATAATGTCGTATCAATGCCGTCACCATTGTCGTTACCATCTGGTTCTCAGCTATTGCTATGTCCATCTGGAACAACACCATCTTTCTTTCCTGCTCCATATGTTACAACCCCAGTAGAGTGCAATATTCCAAGACAAGTCAACCACTTTCAAATGTTGAGCTCAAGTTCTCAAAATCTCCTACCAAATTCTCTCACACCTTTTTACTCAATAAGCCCAATAAACCCACCCATAAGACCCCTCCAACTGAGTATAACTTCCATGCTTCATCCTTCTCAAAACAACAATGGAAGTCAACCAAATAAGGGGACTAGTGGCACAGATCCAAAATCTATGTTTGGATGA 1188 0.4074 MISNSREKDIPAKQEGKTNDGKITKGSSSSRPWQGLKDPRVVRVSRSFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNVAKHEIDELPPLQMPPNFSQYPQSMIVSHEVNALQSASIASVVDANLDYVKEDGSQSLPSSKGGFNINDNIVEEDQTTVPKSIYWNYNAPSRSKCKEVARETIAEKSNWIKRDEQEGQESIEAHNLQVSSHNPLPRATNSSLPGLLNNVMPYNSYYHWDHSNLSLSHLGSHGYSSQMEDPHNYNVVSMPSPLSLPSGSQLLLCPSGTTPSFFPAPYVTTPVECNIPRQVNHFQMLSSSSQNLLPNSLTPFYSISPINPPIRPLQLSITSMLHPSQNNNGSQPNKGTSGTDPKSMFG* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01288 395 MobiDBLite consensus disorder prediction 1 20 - -
Eupl04g01288 395 Pfam TCP family transcription factor 50 206 IPR017887 -
Eupl04g01288 395 MobiDBLite consensus disorder prediction 1 38 - -
Eupl04g01288 395 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Eupl04g01288 395 MobiDBLite consensus disorder prediction 369 395 - -
Eupl04g01288 395 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 334 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01288 Eupl-Chr4 19911715 19916506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01288 35 352 TCP Transcription Factor Family AT5G60970 35.362 8.17e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl04g01288 TCP 7.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01288 - - nnu:104597931 472.241