Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01273 ATGCGAGCTTCGTTTCTTCCCTCTAATCTCCCTGAACCCGTCTCTTCTCATGCTGCAAGATGTGACACAAATGGACCTGGGAATCCTCTCATTCAGGGATTTGGTTTTCCGAGCCTAAAGAAGAGAGGCCATGGTAATCGTTCTTGGATCCAGATCGATCGGTATGGGAATTCAAAGGTTTTGGAACTTGATAAGGCCACCCTTATGAGACATTGTTCCCTACCTGCCAGAGATCTTCGGCTTTTAGATCCTTTGTTCATTTATCCTTCTACAATATTAGGCCGAGAGATGGCTATCGTGGTCAATCTTGAACAGATAAGGTGTATAATCACAGCCGATGAGGTTATTCTGATGAATTCCTTGGATATTTGTGTTATGCAGTATGAATCAGAACTGTGCAAGCGACTTCAGACAAGCAAAGATCAAACCGATGACCTGCCTTTCGAATTCAGGGCACTGGAGCTGGCTTTGGAATTCACGTGCACGTCTCTTGATGCTCAGGTAACAGAACTGGAAATGGAGATATATCCAGTGCTAGAGGAACTAGCATCATCAATTAGCACTCTCAAGCTAGAACGTGTCCGTAGACTCAAAGGCCATCTCCTTGCCCTGACGCGACGAGTTCAAAAGGTTCGTGATGAATTAGAACAGCTCATGGATGATGACGGCGACATGGCTGAGATGTACCTGACGGAGAAGAAAGAGAGAATAGAGGCTTACTCCGCAACGGATCAATATATCTCATCTGTAGCTGGGGTGGTGTCGAAATCTGCACCAGTTTCACCTACAGGTTCAATCAGTGGGTCCCAGAAACTGGAAAGGATGAGCAGTGTTTTGACCTCAAGCAGACATGGAAGCTTATTGGGTTCTACTAATGGGCACAACATCGAAGAGCTTGAAATGTTACTCGAGGCATATTTTGTTGTCATCGACAACAGCCTTAACAAATTGTTATCACTCAAAGAGTACATAGATGACACTGAAGATTTTATCAACATTAAACTGGGCAATGTTCAAAACCAGCTGATACAGTTCGAGGTTCTGCTCACGGCAGCTACTTTCGTGGCTACAATCTTTGCAGTTGTGACTGGAGTCTTTGGGATGAACTTCTCTCCTGCAATTTTCAATTATCCATCTGCCTTCAACTGGGTCTTGATTATAACTGGAGTATCCTGTGCAGTTATATACTTGGCATTCTTGTTATATTTCAAGCACAAGAGAATACTGCCTTTGTAA 1236 0.4385 MRASFLPSNLPEPVSSHAARCDTNGPGNPLIQGFGFPSLKKRGHGNRSWIQIDRYGNSKVLELDKATLMRHCSLPARDLRLLDPLFIYPSTILGREMAIVVNLEQIRCIITADEVILMNSLDICVMQYESELCKRLQTSKDQTDDLPFEFRALELALEFTCTSLDAQVTELEMEIYPVLEELASSISTLKLERVRRLKGHLLALTRRVQKVRDELEQLMDDDGDMAEMYLTEKKERIEAYSATDQYISSVAGVVSKSAPVSPTGSISGSQKLERMSSVLTSSRHGSLLGSTNGHNIEELEMLLEAYFVVIDNSLNKLLSLKEYIDDTEDFINIKLGNVQNQLIQFEVLLTAATFVATIFAVVTGVFGMNFSPAIFNYPSAFNWVLIITGVSCAVIYLAFLLYFKHKRILPL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01273 411 Gene3D Magnesium transport protein CorA, transmembrane region 124 342 - -
Eupl04g01273 411 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 29 409 IPR039204 -
Eupl04g01273 411 Pfam CorA-like Mg2+ transporter protein 294 399 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Eupl04g01273 411 FunFam Magnesium transporter MRS2-1 37 120 - -
Eupl04g01273 411 MobiDBLite consensus disorder prediction 1 22 - -
Eupl04g01273 411 CDD Mrs2_Mfm1p-like 49 408 IPR039204 -
Eupl04g01273 411 Gene3D Magnesium transport protein CorA, transmembrane region 349 409 - -
Eupl04g01273 411 Coils Coil 194 221 - -
Eupl04g01273 411 FunFam Magnesium transporter MRS2-1 349 409 - -
Eupl04g01273 411 Gene3D - 36 120 - -
Eupl04g01273 411 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 348 400 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01273 Eupl-Chr4 19725888 19733621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01273 5 411 MRS2 Gene Family AT2G03620 64.183 2.46e-180 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01273 K16075 - nnu:104599247 619.002