Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01244 ATGACTCCTCTGGAACTCTTTTTCTCCACCATTTTCATTGCCATCCTCATCTACTTCCTGCTTAACCTGCGCTCCCTTCTTAACCGTCGCCCCCACACCCATCCCCTCCCTCCCGGCCCTAAACCATGGCCCATCATCGGCAACCTCCCCCATCTGGGACCTGTCCCTCACCACTCTTTGGCGGCCATGGCTCGCACTTACGGGCCCCTCATGCATCTACGGCTGGGATCCGTTCACGTTGTCGTCGCGGCGTCTTCATCTGTGGCATCGCAGTTCCTGAAGACCCACGACACCAATTTCTCCAGCCGTCCACCTAATTCTGGTGCGAAGCACATCGCTTACAACTACCAGGATCTTGTTTTTGCACCGTACGGACCCAGGTGGCGCATGCTTAGGAAGATCTGCTCCGTGCATCTATTCTCCGGCAAGGCCTTAGATGACTTCCGTCATGTTCGCCAGGAGGAGGTGGCGGTGCTTACGCGCTCCCTGGCGGAATCGGGAGCGGCGCCTGTAAACTTAGGCCAGTTGCTTAACTTGTGCGCCACCAACGCACTTGGGAGGGTGATGCTAGGGCGTAGAGTGTTTGCGAACGGTGGTGGCGAAGACCAGAAGTCGGACGAATTTAAACAGATGGTGGTGGAGTTGATGGTGCTGGCGGGAGTATTCAACATCGGTGATTTTGTTCCTTCACTTGAGTGGTTGGATTTACAGGGTGTTGCATCTAAGATGAAGAAGCTGCATAAGAGGTTTGATGATTTCTTGAATACTATCATGGAAGAACACAAGACCAACGGTGGTGATGGAGTCGGACGACACAAGGACTTGTTGAGTACGTTGATTGCTTTGAAAGAAGATGCGGACGACGGTGAAGGAGGCAAGCTTACGGATACTGAAATCAAAGCCTTGCTTTTGGATTTATTTACGGCTGGCACTGATACATCATCAAGCACGGTGGAGTGGGCCCTAGCGGAACTCATTCGACATCCCAAAATCCTTGCCAAAGCCCAACAGGAATTGGATTCAGTCGTGGGTCGGGACCGGCTTGTGACCGAATCCGATCTAAGCCAACTCACCTTCCTGCAAGCCATTATCAAGGAAACATTTCGGCTCCACCCATCGACGCCACTCTCCCTTCCCCGAATGGCCGCCGAAAGCTGTGAAATCAATGGATACTTCATTCCTAAGAACTCCACCCTTCTAGTGAATGTGTGGGCCATTGCACGTGACCCAGAAGTATGGCCCGAACCACTCCAATTCCGACCCGAACGATTCCTCCCTGGCAGTGAACAAGCCCACATGGATATTCGGGGCAATGACTTCGAAGTCATACCTTTTGGGTCAGGCCGGAGAATATGTGCGGGTATGAGTCTGGGACTACGAATGGTCCAATTCATGACCGCGACTCTGGTCCATTCATTCAACTGGGTCCTACCAGATGGCCAGATGGTGGAGAAATTGAACATGGAGGAGGCATATGGGCTGACATTGCAAAGAGCTGCACCCTTACTGGTACACCCACGTCCTAGGTTGGCACCACACATATACCGTACCGTGTCGTCGAGCTAA 1566 0.5275 MTPLELFFSTIFIAILIYFLLNLRSLLNRRPHTHPLPPGPKPWPIIGNLPHLGPVPHHSLAAMARTYGPLMHLRLGSVHVVVAASSSVASQFLKTHDTNFSSRPPNSGAKHIAYNYQDLVFAPYGPRWRMLRKICSVHLFSGKALDDFRHVRQEEVAVLTRSLAESGAAPVNLGQLLNLCATNALGRVMLGRRVFANGGGEDQKSDEFKQMVVELMVLAGVFNIGDFVPSLEWLDLQGVASKMKKLHKRFDDFLNTIMEEHKTNGGDGVGRHKDLLSTLIALKEDADDGEGGKLTDTEIKALLLDLFTAGTDTSSSTVEWALAELIRHPKILAKAQQELDSVVGRDRLVTESDLSQLTFLQAIIKETFRLHPSTPLSLPRMAAESCEINGYFIPKNSTLLVNVWAIARDPEVWPEPLQFRPERFLPGSEQAHMDIRGNDFEVIPFGSGRRICAGMSLGLRMVQFMTATLVHSFNWVLPDGQMVEKLNMEEAYGLTLQRAAPLLVHPRPRLAPHIYRTVSSS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01244 521 FunFam Red aleurone1 28 507 - -
Eupl04g01244 521 PANTHER CYTOCHROME P450 98A9 11 516 - -
Eupl04g01244 521 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 SUPERFAMILY Cytochrome P450 37 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Eupl04g01244 521 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 Gene3D Cytochrome P450 29 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g01244 521 Pfam Cytochrome P450 37 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01244 Eupl-Chr4 19187826 19192551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01244 7 515 Cytochrome P450 AT5G07990 68.959 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01244 K05280 - nnu:104597960 825.083