Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01234 ATGAGCTCAAGACCGAGAAGCCACAATAGGTCTCTGCGAAGGAGGAGAAGCTCGCGAGGAAGATTGAAGCCTCGTCTCTGCAGAGATCGAAAAACCTTCAACAAAGCCGTTAACGGCGGACGAGGAGCACAACAAGTGGGTGTTTCAGAGAGATTGGAGGTTCTGAAGAATCTGATTCCTGCAAAAAACGGGGAGATGAAAGCGGACCGATTATTCGAAGAAACGGCGGATTATATCGTTTTTCTGAGAACCCAAGTAGAAATTTTGCAGAGATTGATTGATATTTATGGGAACAATGAGAAGGAAAAGGTTGTATAG 318 0.4497 MSSRPRSHNRSLRRRRSSRGRLKPRLCRDRKTFNKAVNGGRGAQQVGVSERLEVLKNLIPAKNGEMKADRLFEETADYIVFLRTQVEILQRLIDIYGNNEKEKVV* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01234 105 CDD bHLH_AtIBH1_like 47 93 IPR044549 GO:0006355
Eupl04g01234 105 MobiDBLite consensus disorder prediction 1 26 - -
Eupl04g01234 105 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 91 IPR036638 GO:0046983
Eupl04g01234 105 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 96 IPR044660 GO:0006355
Eupl04g01234 105 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01234 Eupl-Chr4 18870287 18870918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01234 12 99 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 28.409 1.63e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01234 - - nnu:104598876 116.701