Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01222 ATGATGAATGCTTCAGATTGTTTAGATGCATCTGATCCACACATTGCCTTTCCAGGATGTTTGGGTTCAGATCTAATGGTTGATGACAAAAATAGGGAGAAGCTGATGGGGACTTGCGTCATTTCAATGACCGATTCAGATCTGTCTGCTTACAATGGTGACAAAGTTGTACATGGTAGAGCTGATTGTAGCTGCCCAGACGGGGGTTCTGTCAGATGTGTGAGACAGCACATCACGGAAGCCAGAGAGAAGCTAAGAGGAACCCTTGGGCAAGAGACATTCGTGGAGTTGGGGTTCTGTGAAATGGGAGAGGAGGTGGCAAGGAAATGGAGTGAAGAGGAAGAACAGATCTTCCATGAGGTGGTCTTCTCAAACCCTGCATCATCGGGTAGGAACTTTTGGGACCATCTCTCGGTGGTCTTCCCTTCTCGAACCAGGAAGGACCTTGTCAGCTATTATTTCAATGTCTTTATTCTCCGAAAGCGGGCTGAGCAGAACAGAGTTGACCCTCAGAACATCGACAGCGACAACGATGAGTGGCAGTGTAGCGAGGGTGATGATGAGTTTGGAATGACAGAGGAAGATGAGGACTCTGTGGTAGAGTCTCCGGCTGATCGAAACAGTCCTGTTTATAACGAGGAACATGAAGAGCATTTCCATGAAGATGATGAGGGCGGAGATGAGACTTATGGTAATCACGAGGAAGGTGATCTGGGGGATGATGGGGGTATTGCCGGGGAGGAGGATGAAGGAGGGCTGGATGATGTTTCTGATGGACATTATGGAAAATTGCCTGGCTATTTTAGTTATGATTCCAAAGTGCGGCTTGCTGGTAAGAATCCACAGAATGGCGGGGAGGATCAAGATGTCCAGGATGACTCGTGCACGTCCTACGAGTGTCAGCCCAACAGGGCCGACTCCTGTGGTCCAGCTGAAGCGGGGACTGAGACACAAGACAGTAGGGGTGAGAGCGACCATAGCGAAAACTTGCAAGGTAGCTATGATGGTTTAAGCAGTGGGGTTGACCATGGATATGTATTGGAACCCTGCGATACTAAAGTTTGGGATGTTGGATATCTCACTGGTACAAAGAATGATGTTGATTTCTTACCCACGTGCAGCATGATTGAAGAGGTTTTTGGAGAGGAAGATTGGCATAACAAGGGGAGAGATGGGAAGGGCATCAGCTAG 1191 0.4836 MMNASDCLDASDPHIAFPGCLGSDLMVDDKNREKLMGTCVISMTDSDLSAYNGDKVVHGRADCSCPDGGSVRCVRQHITEAREKLRGTLGQETFVELGFCEMGEEVARKWSEEEEQIFHEVVFSNPASSGRNFWDHLSVVFPSRTRKDLVSYYFNVFILRKRAEQNRVDPQNIDSDNDEWQCSEGDDEFGMTEEDEDSVVESPADRNSPVYNEEHEEHFHEDDEGGDETYGNHEEGDLGDDGGIAGEEDEGGLDDVSDGHYGKLPGYFSYDSKVRLAGKNPQNGGEDQDVQDDSCTSYECQPNRADSCGPAEAGTETQDSRGESDHSENLQGSYDGLSSGVDHGYVLEPCDTKVWDVGYLTGTKNDVDFLPTCSMIEEVFGEEDWHNKGRDGKGIS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01222 396 PANTHER DNA BINDING PROTEIN 23 388 - -
Eupl04g01222 396 Pfam Myb-like DNA-binding domain 109 156 IPR001005 -
Eupl04g01222 396 MobiDBLite consensus disorder prediction 169 260 - -
Eupl04g01222 396 MobiDBLite consensus disorder prediction 208 240 - -
Eupl04g01222 396 MobiDBLite consensus disorder prediction 284 303 - -
Eupl04g01222 396 MobiDBLite consensus disorder prediction 278 338 - -
Eupl04g01222 396 MobiDBLite consensus disorder prediction 179 200 - -
Eupl04g01222 396 CDD SANT 109 157 IPR001005 -
Eupl04g01222 396 SMART sant 106 159 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01222 Eupl-Chr4 18607899 18609089 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl04g01222 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01222 - - ming:122076928 472.241