Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01217 ATGGACGATGAGAAGAAACCTGAATTAGGAACAGAGATTTCGGGCGACTCTAGCTGGGATGATGCTGGTTACTTCTTCGGCAGTGATCGGGAAAGCAGTATTTTGAGCGAATTCGGGTGGAATCTGCAGCCAGAGAGCGACCGGAGTCGTGAAACTAGCAGTTTTCTGGAGTTCGATCAGATCCATTTGGACCACGGTTCGGATTTGGCGGGAAGTACTCGATTGCCGGAAAACCGCTCTTCTTCATGTTTGAACGAGATGGTTCCTGCTGGATCGGTCGATAAATCTGGAGATGTTTCGACGTCAAATCCGTCAGTGTCTTCAAGCTCGAGCGACGAGCTGCCGGAAAAATCGACTGTATCTGACGGAAAACCGCCTGATAAACCGAATAAGGGGAGAAAGAAGGGGCAAAAGCGAACCCGACAACAGCGGTTTGCTTTTATGACTAAGAGCGATGTCGATCATCTTGAAGATGGCTATCGATGGCGGAAATATGGTCAGAAAGCCGTAAAAAATAGCCCATACCCTAGGAGCTATTATCGCTGTACGAACAGCAAATGCACAGTGAAGAAGAGGGTTGAGCGCTCCTCTGAAGATCCCACTATTGTAATCACTACATATGAAGGCCAGCACTGTCACCACACAGTCGGTTTCCCACGAGGCGGCATCTTTTCTCATGAGGCCTCCTTTGCAGGCCGGATGAACACTTCAGCTTCACAATTTTATGTTCCAGGAGTGCAGTTCCCTTTAGAAGCTCCACCCAATGTCAGGCAATCACACCGACTCCAACGTGAACTAGGGTCAGCTCAAGTACTGCCTGTGCCTGCATCGCAGCCGCCGACTGACGACGGACTTCTGGGTGATATTGTACCTCCCGGAATGCGTAGCAGATGA 894 0.4989 MDDEKKPELGTEISGDSSWDDAGYFFGSDRESSILSEFGWNLQPESDRSRETSSFLEFDQIHLDHGSDLAGSTRLPENRSSSCLNEMVPAGSVDKSGDVSTSNPSVSSSSSDELPEKSTVSDGKPPDKPNKGRKKGQKRTRQQRFAFMTKSDVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIFSHEASFAGRMNTSASQFYVPGVQFPLEAPPNVRQSHRLQRELGSAQVLPVPASQPPTDDGLLGDIVPPGMRSR* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01217 297 MobiDBLite consensus disorder prediction 95 116 - -
Eupl04g01217 297 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 221 IPR044810 GO:0003700
Eupl04g01217 297 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01217 297 MobiDBLite consensus disorder prediction 66 147 - -
Eupl04g01217 297 MobiDBLite consensus disorder prediction 272 297 - -
Eupl04g01217 297 FunFam WRKY transcription factor 57 142 216 - -
Eupl04g01217 297 MobiDBLite consensus disorder prediction 1 22 - -
Eupl04g01217 297 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01217 297 MobiDBLite consensus disorder prediction 73 87 - -
Eupl04g01217 297 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01217 297 SUPERFAMILY WRKY DNA-binding domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g01217 297 Gene3D WRKY domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01217 Eupl-Chr4 18553048 18555956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01217 1 296 WRKY Transcription Factor Family AT1G69310 47.302 2.40e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl04g01217 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01217 - - nnu:104597986 363.229