Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01211 ATGGAAGAGCCCACCAGTCAAGGTAAAGACCTGATGGAGTCTTATGTGGCTTTGGAGGATGAAGATGAAGAGTGTTGTGTCGTAGAGGATATTGAAGTTCCTATGGTTGTGGATGATGCGAAGAACGAAGATTCAATGAATCTCGAGCTGTCTACATGTCTGGTTGGTGGAATTATAGAACCAACCATGGACATGGAGTTTGATTCTGAAGATGATGCGAGAAATTTTTACAATGCATATGCTAAGCAGATGGGCTTTAGCATTCGTGTGAACTCGTACTATCGTTCAAAGAAAGACAACTCGATTATTTCTCGGGAATTTTGTTGCTCTAAAGAAGGTTTCCGCCGGGAGAAACGTGCAAGAAAGGTAGATTCGAGTGATGATATGAGACGGAGACGAGCCCGACCAATCACAAGGGAAGGTTGCAAGGCACTGATGACCGTAAGGAGGCGAGATAACGGGAAGTGGTATGTTGCAAAATTGGAGAAGAGCCATAATCATGAATTAGTGAATCCAGCAATGAGACATTTTCTTCGATCTCACCGGCAGGAATATGATCCGAAGAAAAGTTTGATAAGTACTTTCGGTTCACCCGGAATGGGTACAAGCAGTACAGTGAATCTCTTAACTGAAGAATGTGGTGGGATTAGCAGCATGGGATACCCTGCACAGGATCAGAGTAATTATATTGCAAAAGGACGGCTTAGCACCTTTGGGATAGATGCCCAAAGCCTCCTAGGATTTTTCAAGATTATGCAAGCAAATGACCCTGCATTTTTTTATGCTATACAGGTTGATGACGAAGATCGTCTGAGCAGTGTTTTTTGGGTTGACACGAGGTCCAGAATCGCTTACAATTGCTTCTCCGACGTGGTTGCATTTGACACAACATACCAAGTGAATCAATATAAAATGCCATTCGCTCCATTCACTGGAGTAAATCATCATAAACAGTCCGTATTGTTTGGTTGTGCATTGCTTGCAGATGAGACTGAGTCCACATTTGTTTGGCTTTTCAAGACCTGGCTTGAAGCTATGTCTGGGCACCAACCAGGCTTACTAATAACAGATCATGATATGGCCATAAGGAATGCAGTTGCAAGGGTTTTCCCAGAATCTCGCCATCGATATTGCAAATGGCACATCCTGAGCAAAATGCCTAAGGAATTGGGACATGTATATAGTGCACTTCCAAAGACATTTCAATTGGAATTTGATAAGTGCTTCAACAAGAGTGAGACAATTGATGAGTTTGAATTTGCTTGGGAATGTGTCCTTGATAAGTACAATATTGGGGAGAACGAATGGCTTCAATCATTATATGTTGATCGCAAATATTGGGTCCCTGCATACTTACGAGATACGTTCTTTGCAGGAATGTCTGCAAGCCAACGAAGTGGAAGTGTAAATTCACTTTTCGATGGATACGTGAATGCAAGAACGACGTTAGAAGATTTTGCTGAGCAGTATGAGAAGGCTTTAGATGATCGGTTTGAAAAAGAAGCACGAGCAGAATTTGACACATTTTACACAAAACCAGTTCTAAAGACGCCCCTGCCTATAGAGAAACAAGCAGCAGAAACTTATACAAGAAAAATGTTCACAGTTTTCCAGGAAGAAATTTTTGAATCTCTAGTCCTTGCTGTGAAAAAGAGTGCGGAGGATGTAGAAACCACCACATATGAAGTAGCGAGATTTGACGAAGAACATAAAGTGTATACCGTTGCATGTAATGTTTCTGAACAAATAGCTAGTTGCAGTTGCAAGATGTTCGAGTCCGAAGGCATCCTCTGTAAACATGTACTTGCAGTATTCAAAGCAACAAATGTCTTTATGCTTCCATCACATTATATCTTGAAGCGGTGGACAAGAAATGCTAAGGATGAGGTTGTATTGGATATGGTACCCTGTGTGGAGTTGCAAGCTAATTCTCAAAAGGCCAAGAACTCGCAGTACAATGTTTTGTATCAAGAAGCCATTAAATGTGCAGAGGAAGGGGTGGCATCTGACCATAGTTTTAAGGTGGCATTGACGGCTTTACGAGAGGCAAGGAGGAAAATTATTGATGCGAAGAAAAATGCTGCTAATGCCCCAAAGCTTGAAACTGTGGTTAGTGCGAGTTATCAGGATGGGAACAACATGATCGGGAATCAGGTAGACGGTTCTACATTCCCGATAACTCCCCGTGATCCCCAGAAAACTAAAACAAAAGAGTCTCCTTCCAGTAATAATAAATCCAAATCTGTATCAGAGCAGCCTGCAAGCAGAATTAGGACATGCACTAAATGTAGGTGTCCTGGACACGATAGTCGCACTTGCTTGTGGTTGAAGGATCCAGACCCAAACACTGTTATGGGTCAGCCAAATCAAGAGTTAGCATCTATGGACAGTCAATATGGGACCCAAGATAACATTCCTCAAAGTTAA 2427 0.4203 MEEPTSQGKDLMESYVALEDEDEECCVVEDIEVPMVVDDAKNEDSMNLELSTCLVGGIIEPTMDMEFDSEDDARNFYNAYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRREKRARKVDSSDDMRRRRARPITREGCKALMTVRRRDNGKWYVAKLEKSHNHELVNPAMRHFLRSHRQEYDPKKSLISTFGSPGMGTSSTVNLLTEECGGISSMGYPAQDQSNYIAKGRLSTFGIDAQSLLGFFKIMQANDPAFFYAIQVDDEDRLSSVFWVDTRSRIAYNCFSDVVAFDTTYQVNQYKMPFAPFTGVNHHKQSVLFGCALLADETESTFVWLFKTWLEAMSGHQPGLLITDHDMAIRNAVARVFPESRHRYCKWHILSKMPKELGHVYSALPKTFQLEFDKCFNKSETIDEFEFAWECVLDKYNIGENEWLQSLYVDRKYWVPAYLRDTFFAGMSASQRSGSVNSLFDGYVNARTTLEDFAEQYEKALDDRFEKEARAEFDTFYTKPVLKTPLPIEKQAAETYTRKMFTVFQEEIFESLVLAVKKSAEDVETTTYEVARFDEEHKVYTVACNVSEQIASCSCKMFESEGILCKHVLAVFKATNVFMLPSHYILKRWTRNAKDEVVLDMVPCVELQANSQKAKNSQYNVLYQEAIKCAEEGVASDHSFKVALTALREARRKIIDAKKNAANAPKLETVVSASYQDGNNMIGNQVDGSTFPITPRDPQKTKTKESPSSNNKSKSVSEQPASRIRTCTKCRCPGHDSRTCLWLKDPDPNTVMGQPNQELASMDSQYGTQDNIPQS* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01211 808 MobiDBLite consensus disorder prediction 737 753 - -
Eupl04g01211 808 MobiDBLite consensus disorder prediction 767 808 - -
Eupl04g01211 808 MobiDBLite consensus disorder prediction 714 753 - -
Eupl04g01211 808 MobiDBLite consensus disorder prediction 783 808 - -
Eupl04g01211 808 ProSiteProfiles Zinc finger SWIM-type profile. 573 609 IPR007527 GO:0008270
Eupl04g01211 808 SMART 26again6 584 611 IPR006564 GO:0008270
Eupl04g01211 808 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 687 IPR031052 GO:0006355
Eupl04g01211 808 Pfam MULE transposase domain 291 384 IPR018289 -
Eupl04g01211 808 MobiDBLite consensus disorder prediction 714 730 - -
Eupl04g01211 808 Pfam SWIM zinc finger 573 608 IPR007527 GO:0008270
Eupl04g01211 808 Pfam FAR1 DNA-binding domain 75 170 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01211 Eupl-Chr4 18465559 18472935 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl04g01211 FAR1 1.2e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01211 - - nnu:104598679 1318.52