Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01198 ATGCCCTTACTTTCGGAATTCCGCGTCTCCCTCCCAAGGTGGAATGGAAAACTGGGGCACCGAAAGACCAATTTGGACGAAGATGATGAGGAAGAGAACCCAATCTCAAATTCAGTCGAGTGTTACGCATGCACACAAGTCGGTGTGCCTGTCTTTCACTCCACTAGTTGTGATCGTGTCCACCCACCTGAGTGGGAAGCATGTGCAGGATCCTCGTTGATCCCAATTCAAAACCGCCCCGAAGGCCGATCCAATAAGAACCGTCGATCAGATCGACGATCCTTATCGGGTGCCTTTGGCCCTGTACTAGACCCACGTAGCAAACGTGTGCAATCATGGAACCGTACGTTCCTAATCGCACGAGGCATGGCACTAGCAATTGATCCTTTGTTCTTCTACGCACTCTCAATCGGACGGGACGGAACACCGTGCCTTTACATGGATGGAGGACTAGCAGCAATAGTAACCGTGCTCCGCACATGTCTTGACGCGGTGCATTTGTGTCACTTGTGGCTCCAATTCCGACTTGCTTATGTGTCAAGGGAGTCACTCGTGGTCGGGTGTGGGAAGCTCGTGTGGGACGCACGTGCTATTGCTTCTCACTACGTGCGATCACTCAAGGGATTCTGGTTCGACGCCTTTGTCATACTTCCTGTGCCCCAGACGGTTTTTTGGTTGGTCGTGCCGAAATTGATCAGGGAAGAAAAGATCAAGCTCATAATGACCATCCTTCTACTAATGTTCTTATTCCAATTCCTCCCTAAGGTCTACCATAGCATTTGCTTGATGAGAAGAATGCAGAAGGTCACTGGTTACATTTTCGGGACGATCTGGTGGGGTTTCGGCCTTAACCTAATCGCCTACTTCATCGCCTCCCACGTAGCTGGGGGTTGTTGGTACGTTCTTGCAATTCAACGCGTTGCTTCGTGCCTTCGACAGCAATGCGAGAGAGGTAACAAGTGCAACCTCTCGTTGTCTTGCTTGGAAGAGATTTGTTACCGGCTTCCGATCAACAATCCGTGTGCGAATAACTCGACAACTCTCAAAGTCCCTAGCATCCCTGTTTGTTTAAACAGCAATGGGCCGTTCCATTACGGTATCTATAAGTGGGCGCTCCCTGTCGTTTCTAGCAATTCTCTGGCCGTTAAGATCCTTTACCCCATATTTTGGGGCCTAATGACCCTCAGCACCTTTGGTAACGATCTCGAACCTACGAGCCATTGGTTGGAAGTGGTTTTCAGTATAATTATTGTGCTAAGTGGTTTACTACTATTCACTCTATTGATCGGGAATATTCAGGTATTTTTGCACGCAGTCATGGCGAAGAAGAGGAAGATGCAATTAAGGTGTCGAGACATGGAATGGTGGATGAAACGGAGGCAATTGCCATCACGTCTGAGACAAAGAGTCCGCCATTATGAACGCCAGCGATGGGCGGCCATGGGAGGAGAAGATGAGATGGAGCTGATCAAAGACTTGCCAGAAGGACTTAGGCGAGACATCAAGCGTCATCTTTGCCTCGATCTAATCAAGAAGGTGCCATTGTTCCACAATTTGGATGATCTGATCTTGGATAATATCTGCGATAGAGTTAAGCCGCTCGTCTTCTCTAAGAGCGAGAAGATAATTAGAGAAGGTGACCCAGTGCAGCGTATGATATTCATTGTGAGCGGGCACTTAGAGAGTAGCCAAAGGCTTAGCAAAGGCATGGTAGCGACGTGCAAGCTAGGACCCGGAAACTTTCTTGGGGACGAGCTACTTTCATGGTGCCTTCGACGCCCATTTATGGACCGCCTCCCTGCCTCGTCTGCTACGTTTGTCTGTGTCGAAGCAACAGAAGCATTTGGTCTAGATGCAAACCATCTCCGATATATCACTGATCACTTCCGGTACAAATTTGCCAATGAAAGACTTAAGAGTACGGCCAGGTACTACTCATCGAACTGGCGAACATGGGGTGCTGTAAACATCCAATTCGCATGGCACCGTTACAAGTTGAGGACAAGGGGTCCTGTGATTCAAGTAACGGAAAATGGCGATAGCGACCATCGACTTCGGCAATATGCTGCAATGTTCTTGTCTCTTAGGCCGCATGACCACCTCGAATAA 2109 0.4884 MPLLSEFRVSLPRWNGKLGHRKTNLDEDDEEENPISNSVECYACTQVGVPVFHSTSCDRVHPPEWEACAGSSLIPIQNRPEGRSNKNRRSDRRSLSGAFGPVLDPRSKRVQSWNRTFLIARGMALAIDPLFFYALSIGRDGTPCLYMDGGLAAIVTVLRTCLDAVHLCHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQTVFWLVVPKLIREEKIKLIMTILLLMFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERGNKCNLSLSCLEEICYRLPINNPCANNSTTLKVPSIPVCLNSNGPFHYGIYKWALPVVSSNSLAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVVFSIIIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHYERQRWAAMGGEDEMELIKDLPEGLRRDIKRHLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKSEKIIREGDPVQRMIFIVSGHLESSQRLSKGMVATCKLGPGNFLGDELLSWCLRRPFMDRLPASSATFVCVEATEAFGLDANHLRYITDHFRYKFANERLKSTARYYSSNWRTWGAVNIQFAWHRYKLRTRGPVIQVTENGDSDHRLRQYAAMFLSLRPHDHLE* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01198 702 Gene3D Helix hairpin bin 441 506 - -
Eupl04g01198 702 Pfam Ion transport protein 112 433 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl04g01198 702 Gene3D Jelly Rolls 513 631 IPR014710 -
Eupl04g01198 702 MobiDBLite consensus disorder prediction 76 100 - -
Eupl04g01198 702 Gene3D - 144 438 - -
Eupl04g01198 702 SUPERFAMILY cAMP-binding domain-like 442 629 IPR018490 -
Eupl04g01198 702 CDD CAP_ED 515 625 IPR000595 -
Eupl04g01198 702 Pfam Cyclic nucleotide-binding domain 535 623 IPR000595 -
Eupl04g01198 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 88 667 - -
Eupl04g01198 702 ProSiteProfiles cAMP/cGMP binding motif profile. 515 625 IPR000595 -
Eupl04g01198 702 SMART cnmp_10 515 641 IPR000595 -
Eupl04g01198 702 SUPERFAMILY Voltage-gated potassium channels 104 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01198 Eupl-Chr4 18273686 18280238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01198 32 702 Ion Channels AT5G15410 76.642 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01198 K05391 - nnu:104598015 1184.47