Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01185 ATGGCGCTGTTCAGAAGGTTGTTCTATCGGAAACCGCCAGACCGGCTTCTGGAGATCTCTGAGAGAGTTTATGTGTTCGATTGTTGCTTCTCTACAGACAGTTTGGAAGAGGATGAATACAAGGTTTACATGGGTGGCATCGTGGCCCAGCTACAGGACCACTTCCCAGATGCCTCTTTCATGGTTTTTAACTTTAGGGAGGGAGAAAGGAGGAGCCAGGTTTCAGACTTATTGTCTCAGTACGACATGACTGTTATGGACTATCCTCGGCAATATGAGGGATGTCCTCTGTTACCATTGGAGATGATCCACCACTTCTTGAGATCAAGTGAGAGCTGGTTGTCATTGGAAGGGCAACAGAATGTGCTGTTGATGCACTGCGAGAGAGGAGGATGGCCCGTGCTCGCCTTTATGCTTGCGGGTCTCTTGTTATACAGAAAGCAGTACACTGGGGAGCAGAAGACTTTGGAAATGGTCTACAAGCAAGCTCCTAGGGAACTCCTTCATCTCTTGTCTCCTTTAAACCCACAACCTTCCCAGTTGAGATATCTCCAGTACATCTCCAGAAGAAATCTTGGTGCAGATTGGCCTCCATTGGGTACTCCTTTGATTGTGGATTGTCTTATCCTTAGAGTCCTTCCAATGTTCAATGGAGAAAGGGGTTGCAGGCCAGTAGTTCGTGTTTATGGTCAGGATCCTTCATCTGCAGCCAACAGAAGTTCAAAAATTCTATTTTCAACCCAAAAGACGAAGAAACATGTGCGCCACTACAGACAGGCAGAGTGTACACTAGTGAAAATAGATGTACATTGCCGTGTTCAAGGGGATGTGGTTCTCGAGTGCATCCATTTGGATGAAGATCTACTACGTGAGGAAATGATGTTCAGGGTTATGTTCAATACGGCATTTATCAGATCAAACATTTTGATGCTGAACCGTGAGGAGATTGATGTTTTGTGGGATTCCAAGGACCAGTTTCCAAAAGACTTCAAAGCAGAGGTACTCTTTTTGGATGTTGCGTCTAATATCACCACAGAAGTTGTAAGTGGAGACGAGGATGAGAAAGAAGGTGCAACTGAGGAGTTCTTTGAGGTGGAGGAGATCTTCAGCAGTGTAGATGGGCAGGACGGAAAGGGGGATTCTGATCTTCAGAGAGATCAAGACAGAACATTGGGTGATGGGAATCACAAACAGGATAGGAGGGGGGATTCTGATCTTCACACAGTTCAAGACAGCAAAATGGATGATGGAAATCAGAAACAGGATTGGAAGGGGTATTCTGATCTTCCCACACGTCAAGGCAGTAGTTTTGATGATGGAAATCTCAAAGTAGAAGCCAAGGCAGCAACTGCTGATGTGCACTGCAAATGGGAAGCTAAGGCACTGACTGATGTACACTGCAAACAAGAATCAAGTGATAATAGACAGGATACAGGAAACATTGCTACCCAGAAGAATTTAGAATCCAAGTTTCTGCAGCAGAAGTTGGATACTCGTATTCGTAGACAGAACTTTGATAGATTACTTCCTCCCATGTCAAAGAAACCGCCAATTCCCAGTGTTAAACCAGCCTCAGATTCAGTTGTAGCAAAACAAAATATTAAACAGCAGGAATCTAAGGGCACTCCCATGAAATCAACAAAACCGAGGACTGTATCTCGTTGGATTCCCCCAAACAAGGGGCCTTACACTAATTCCATGAACTCATCATCTTACCTGCCATCAAGATATAACAGTGCACCATCTGCTCTAGCCATTACTTCACTTTTACAAGATTGCAATGCAGGTGAAACCCCGAAGGCTCTTCCAATAGTTTCACCAGACCTGGTTAACATATCTCACGACGTTGATTCTGTCACACCTTCCGAATCTCCACAGGATGCACTCAGTCCCTCTGCATCACCGTCATTATTTCCCCCGCAAGTAACATCCGCTCATCACCCTCCACCTTTGTTGCCATCTTCTCCACCACAAGTTGTCCCTCCTTCTCCCTCCCCACCACCTCCGACTCCTTTGCGGGCAATCCCTCCTCCCCCTCCACCTCCACCACCGGCCCCTCACCCATACGCACCTGTTCAGTCTCTTCAACTGCCTCCTCCACCCCCACCTTCCCCACCTTTTCGAATAGGAAAAACACTTCAGACCCCCCCTCCCACTCCCCCTCATAATGCAGTTGTGTCATGTGCTTCTTCACTCCCACCTTCACCACCACCACCTCCTCCTCCTCCTCCTCCTCTTCCACCACCATTCTCGCGCCTTGGTGGAACAGTGTTTCCTTCCCCTCCCCCTCCTTTCAAGCAAAATGTTGTTGGATCAGCTGTCCCTCCACCACCTCCTCCACCCCCTTTTAAGGTTGGGGCTTCTTCAAATGGCCCTACGCTGGTGGTACCCTTTCCACCTCCTCCTATGCATGGAGCCCCACCTCCCCCACCTCCTCCTATGCATGGAGCTCCACCTCCACCACCCCCACCTCCTCCTATGCGTGGAGCTCCACCTCCACCACCCCCTCCTATGCATTGTGTTCCACCTCCACCACCTCCTCCTATGCGTGGAGCTCCACCTCCACCACCCCCTCTAATGCGTGGTGCACCCCCTCCTCCACCCCCTCCTATGCGTGGTGTTCCACCTCCACCACCTCCTCCTATGCGTGGAGCTCCACCTCCACCTCCAGCATTGCCTGCAACACGTGGGGCACCACCTCCACCTCCTCCTCCTGGAGTTCGCACACCTGGTCCCCCTGCTCCACCTAGACCTCCAGGTGGTGCAATTCCTCCACCTCCACCCTTTGGTGCAAAAGGAACATCATTTGGTTCAAATGCTGACTCAAGAGGATTATCCTCGGGAGGAACGCGTGGGCTTACACGTTCTGCAGGCCTAGGTTATCAGGGGTTTCCTGCTTCAGCACCTCGAAGATCATCATTGAAGCCACTACATTGGATTAAGGTTACAAGAGCAGTGCAAGGAAGCTTATGGGAAGAATTACAGAGATATGGTGAACCTCAAAGTGCGTCAGAATTTGATGTGTCAGAACTTGAGAGTCTTTTCTCTACTGCGGTTCCAAATACGGTTGATAGCTCAGGAGGCAAATTTGGAGGGAGGCGCAAGTCTGTTGGATCTAAAACAGACAAAGTCCACCTGATTGACCTGAGGCGCGCCAATAACTGTGAAATTATGCTCACAAAAGTTAAGATGCCACTTTCTGATATGATGGATGCAGCGCTAGCATTGGATGAATCAATTTTAGACGTTGATCAGGTGGAAAATCTTATAAAAAACTGTCCTACAAAAGAGGAGATGGAACTTCTTAAGGGCTACAATGGTGACAAAGAAAAGCTGGGAAAGTGCGAACAGTTCTTTTTGGAGCTGATGAGAGTTCCACGGGTGGAGTCCAAGTTAAGAGTATTTTCTTTCAAGATTCAATTTGGCTCTCAGATTACAGATTTTAGGAAGAGTTTAAACACTGTAAACTCTGCATGTGAAGAGGTTCGAAATTCCTTCAAATTGAAGGAAATCATGAAGAAAATTCTCGACCTGGGGAATACATTAAACCAAGGAACTGCGAGGGGTTCTGCTATTGGATTCCGGTTGGACAGCCTTTTAAAACTCACTGATACACGTGCTTCTAACAATAAAATGACACTCATGCATTTTCTTTGTAAGGTGCTTGCCTCTAAGTCACCAGGACTTCTAAATTTTCAAGAGGACCTTGTTAGCCTGGATGCTGCATCAAAGATACAATTGAAATCCTTAGCAGAAGAAATGCAAGCCATTATCAAAGGGTTAGAAAAGGTTAAGCAAGAGCTGGTTGCATCCGAAAATGATGGTCCTGTGTCAGAAATTTTCCGGAAGACATTGAAGGAATTCGTTGGTGTTGCTGAAAGAGAAGTAACATCATTAAAATCATTGTATTCTGCAGTGGGTAAAAATGCAGATGCACTCGCTCTTTATTTCGGTGAAGATCCTGCCCGTTGCCCATTTGAACAAGCTACCGCGACTCTATTAAATTTTGTGAGGATGTTCCGGAGAGCACATGAGGATAACTGTAAGCAGGCTGAGCTGGAGAGGAAGAAAACCCAGAAGGAGGCTGAAGTGGAGAAGGCAAAGGGTGTTAACCTAACAAAGAGAACTGTGAAATAG 4137 0.4726 MALFRRLFYRKPPDRLLEISERVYVFDCCFSTDSLEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGERRSQVSDLLSQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRNLGADWPPLGTPLIVDCLILRVLPMFNGERGCRPVVRVYGQDPSSAANRSSKILFSTQKTKKHVRHYRQAECTLVKIDVHCRVQGDVVLECIHLDEDLLREEMMFRVMFNTAFIRSNILMLNREEIDVLWDSKDQFPKDFKAEVLFLDVASNITTEVVSGDEDEKEGATEEFFEVEEIFSSVDGQDGKGDSDLQRDQDRTLGDGNHKQDRRGDSDLHTVQDSKMDDGNQKQDWKGYSDLPTRQGSSFDDGNLKVEAKAATADVHCKWEAKALTDVHCKQESSDNRQDTGNIATQKNLESKFLQQKLDTRIRRQNFDRLLPPMSKKPPIPSVKPASDSVVAKQNIKQQESKGTPMKSTKPRTVSRWIPPNKGPYTNSMNSSSYLPSRYNSAPSALAITSLLQDCNAGETPKALPIVSPDLVNISHDVDSVTPSESPQDALSPSASPSLFPPQVTSAHHPPPLLPSSPPQVVPPSPSPPPPTPLRAIPPPPPPPPPAPHPYAPVQSLQLPPPPPPSPPFRIGKTLQTPPPTPPHNAVVSCASSLPPSPPPPPPPPPPLPPPFSRLGGTVFPSPPPPFKQNVVGSAVPPPPPPPPFKVGASSNGPTLVVPFPPPPMHGAPPPPPPPMHGAPPPPPPPPPMRGAPPPPPPPMHCVPPPPPPPMRGAPPPPPPLMRGAPPPPPPPMRGVPPPPPPPMRGAPPPPPALPATRGAPPPPPPPGVRTPGPPAPPRPPGGAIPPPPPFGAKGTSFGSNADSRGLSSGGTRGLTRSAGLGYQGFPASAPRRSSLKPLHWIKVTRAVQGSLWEELQRYGEPQSASEFDVSELESLFSTAVPNTVDSSGGKFGGRRKSVGSKTDKVHLIDLRRANNCEIMLTKVKMPLSDMMDAALALDESILDVDQVENLIKNCPTKEEMELLKGYNGDKEKLGKCEQFFLELMRVPRVESKLRVFSFKIQFGSQITDFRKSLNTVNSACEEVRNSFKLKEIMKKILDLGNTLNQGTARGSAIGFRLDSLLKLTDTRASNNKMTLMHFLCKVLASKSPGLLNFQEDLVSLDAASKIQLKSLAEEMQAIIKGLEKVKQELVASENDGPVSEIFRKTLKEFVGVAEREVTSLKSLYSAVGKNADALALYFGEDPARCPFEQATATLLNFVRMFRRAHEDNCKQAELERKKTQKEAEVEKAKGVNLTKRTVK* 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01185 1378 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1042 1368 - -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 615 641 - -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 424 438 - -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 1353 1378 - -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 794 931 - -
Eupl04g01185 1378 Gene3D Formin, FH2 domain 966 1352 IPR042201 -
Eupl04g01185 1378 Coils Coil 1341 1370 - -
Eupl04g01185 1378 Pfam Formin Homology 2 Domain 970 1340 IPR015425 -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 935 953 - -
Eupl04g01185 1378 Coils Coil 1247 1271 - -
Eupl04g01185 1378 SMART it6_source 736 1376 IPR015425 -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 532 570 - -
Eupl04g01185 1378 Gene3D - 204 336 - -
Eupl04g01185 1378 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 642 723 - -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 731 786 - -
Eupl04g01185 1378 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 508 527 - -
Eupl04g01185 1378 SMART PTEN_C2_2 198 338 IPR014020 -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 372 440 - -
Eupl04g01185 1378 ProSiteProfiles Formin homology-2 (FH2) domain profile. 964 1366 IPR015425 -
Eupl04g01185 1378 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 336 IPR035892 -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 378 422 - -
Eupl04g01185 1378 Pfam C2 domain of PTEN tumour-suppressor protein 202 336 IPR014020 -
Eupl04g01185 1378 PANTHER FORMIN-J 1 706 - -
Eupl04g01185 1378 Gene3D Protein tyrosine phosphatase superfamily 14 203 IPR029021 -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 615 970 - -
Eupl04g01185 1378 MobiDBLite consensus disorder prediction 1353 1372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01185 Eupl-Chr4 18103041 18133606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01185 1 654 FH2 protein (formin) Gene Family AT5G07740 55.539 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01185 - - nnu:104598193 836.639