Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01183 ATGGGTTGCATTACCTCGAAGCAGGCAGTCTCTGTGACGCCTGCTTTCGATTACTCGGGGGCATTTCGGGAAAATGGGTCGGGGGTTTTGTCTTCTTCACTGCGAAACCGAACCGGGTTGCCAGAATTGGAGAAGAAGAAGGCCGAGTCAGGTAGTGGTGGCGAAGAATTGGTGGAGTCGAGGAGGGGGAGCTCCAATGGTGGGGATTCATTGAGCTTGAGCCAGAGATTGGGGAATTTGCATAAGTATGTTGAAGGGGAGCAAGTCGCCGCTGGGTGGCCTGCTTGGCTCAGCGCCGTAGCTGGAGAAGCCATTCAGGGATGGGTGCCTCTCAGAGCTGACTCTTTTGAGAAATTGGAGAAGATTGGACAAGGTACATATAGTAGTGTGTTCCGAGCACGAGACCTTGACAATGGGAGAATAGTTGCTCTGAAGAAGGTCCGGTTTGACAATTTTGAGCCCGAGAGTGTGAGGTTTATGGCACGAGAAATAATGATTCTTCGCAGACTAGACCATCCAAACATCGTGAAATTGGAGGGGTTAATTACCTCGCGATTATCATGTAGCATATACCTTGTATTTGAATACATGGAACATGATCTTGCTGGATTGTCGTCTTGCCCGGATATCAAGTTCAGCGAATCACAGATTAAGTGCTATATGCACCAGTTATTATCTGGACTCGAGCACTGCCACTCACGGGGTGTAATGCATCGGGACATCAAGGGATCCAATCTTCTGGTCAATAATGAAGGAGTTCTGAAGATGGCCGATTTTGGCCTGGCAAATTTCTTTAGTCCAGGATACAGGCAGCCGCTAACTAGTCGAGTTGTGACTCTATGGTACCGCCCTCCCGAACTTTTGCTGGGATCCACAGATTATGGAGCATCTGTAGATTTGTGGAGTGTTGGTTGTGTGTTTGCAGAACTTTTCCTTGGGACACCTATCCTTCAGGGGAGAACTGAGGTTGAACAATTACACAAAATCTTCAAGCTCTGTGGTTCCCCGCCCGATGAGTATTGGAAAAAGTCTAAACTGCCTCATGCAACTATATTTAAACCCCAGCATCCATATGAGAGTTGTCTTCGTGAGACCTGTAAAGAATTACCAACAACGGCCTTAAATTTGATAGAAACTCTTCTTTCTGTAGAACCTTATAAGCGCGGAACCGCTTCCTCTGGTCTTGCATCCGAGTATTTCACAACGAAGCCTTATGCATGCGACCCATCAACCTTGCCAAAGTACCCTCCTAACAAAGAGATCGATGCAAAATGTCGTGAGGAGGCACGAAGGAAAAAGGCTGGTGGGAGAGCGCGTGGGCCTGAAGCAACAAGAAGGCTGACAAGAGTATGTAAAGCTTTACGAGAAGCAAATGGACCTCCTAAATCAGTTGCACCAACAGTGGGGTCACAAGTCAATACCCAATTTTCCCAGAAAACCAACGGTGGTAATGCACGTTTACCTAAGGGAGATGCCGATGCTAAATTATGTGGGGAACCTCCCAAGCCATCAATTGATATGGTTCAAGAGGCTTCCCATGTAAAGAATGCATCTCAAGGGGACATTCCTTTCTCAGGCCCGCTAAACGTCACAGCATCAAGCGGCTTTGCATGGGCAAAAAGACGAAAAGAAGATGCGGCATCCATAAGATCACACAGTAGGTCTAGTTCAAGAGGTCAAGTGTGTAGTGCATTAGATCCCCAAAGTGTTCTGCAAGTGAGAAATACTTGTGAATCAAAATTACAAGAAAATGGGGACATTTTACATGGGGCCCGAACTGATTCTAGAGGCCATGACTCATACGAGATTGCCAAGCATGCAGTGCGGAAACAGTGGAGCCAGTTTGAGCGTCCAGATTCTTTTGATGCATCTGATGTATACCATTCTCAGGAACTGTCCGCAGCACTTTATCAAAGAGAGGAAATGGCAGTTAAGAGACACAACCTGGGTTATCAGGATCAAGGAGAAAGAGTTGAGTTCTCAGGACCATTGTTGTCTCAATCACATAGAGTTGATGAGCTCTTGGAGAGGCACGAACGCCATATCCGTCAAGCAGTCCGTAGATCATGGTTCCAGAGAGGGAGAAAGCAAGGAAAATAG 2100 0.4695 MGCITSKQAVSVTPAFDYSGAFRENGSGVLSSSLRNRTGLPELEKKKAESGSGGEELVESRRGSSNGGDSLSLSQRLGNLHKYVEGEQVAAGWPAWLSAVAGEAIQGWVPLRADSFEKLEKIGQGTYSSVFRARDLDNGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIVKLEGLITSRLSCSIYLVFEYMEHDLAGLSSCPDIKFSESQIKCYMHQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKMADFGLANFFSPGYRQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSVGCVFAELFLGTPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATIFKPQHPYESCLRETCKELPTTALNLIETLLSVEPYKRGTASSGLASEYFTTKPYACDPSTLPKYPPNKEIDAKCREEARRKKAGGRARGPEATRRLTRVCKALREANGPPKSVAPTVGSQVNTQFSQKTNGGNARLPKGDADAKLCGEPPKPSIDMVQEASHVKNASQGDIPFSGPLNVTASSGFAWAKRRKEDAASIRSHSRSSSRGQVCSALDPQSVLQVRNTCESKLQENGDILHGARTDSRGHDSYEIAKHAVRKQWSQFERPDSFDASDVYHSQELSAALYQREEMAVKRHNLGYQDQGERVEFSGPLLSQSHRVDELLERHERHIRQAVRRSWFQRGRKQGK* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01183 699 MobiDBLite consensus disorder prediction 39 56 - -
Eupl04g01183 699 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Eupl04g01183 699 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01183 699 MobiDBLite consensus disorder prediction 33 70 - -
Eupl04g01183 699 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Eupl04g01183 699 FunFam probable serine/threonine-protein kinase At1g54610 199 439 - -
Eupl04g01183 699 CDD STKc_CDK9_like 116 400 - -
Eupl04g01183 699 SUPERFAMILY Protein kinase-like (PK-like) 110 406 IPR011009 -
Eupl04g01183 699 Gene3D Transferase(Phosphotransferase) domain 1 199 438 - -
Eupl04g01183 699 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01183 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Eupl04g01183 699 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Eupl04g01183 699 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Eupl04g01183 699 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01183 Eupl-Chr4 18054476 18062506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01183 108 461 Core Cell Cycle Gene Families AT5G10270 46.486 1.77e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl04g01183 Pkinase 2.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01183 - - nnu:104598040 1099.73