Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01182 ATGGCTGAAAACAATGGAATTTCAAGAGCAACAGCTCCTCCTCGCCCTACGATTGTTCTCCCGCCTCGATCCTCCGTCGAGAATCTCTTCATAGGCGGAGCTGGTGCGAGCCCTGGTCCGATGACGCTCGTCTCGAATTTCTTCTCCGACAACGATCCCGACTCCGAGTGTCGGTCGTTCTCGCAGCTCCTAGCTGGGGCCATGGGTTCCCCGGTTGCGGTCACCGGTTGGAGACCAAGCTTTTTGATGGAGAATTCGCCGGAGGGGGAGAGGGATTCGGGAGTTAGAGGTGAAAAGGATTTCCGGTTTAAGCAGAATCGTCCGTTGGGTTTAGTAATTGCGCAGTCACCCATGTTTACGATTCCGCCTGGGTTGAGCCCTGCAAGCTTGCTGGATTCGCCTGGATTCTTTTCGCCTGTTCAGGGCCCATTTGGAATGTCCCATCAACAGGCCCTGGCTCAAGTTACCGCTCAGGCTGTCCAATCCCAATCTCATATGCACATCCCAGCTGAATATCCATCTTCTCTGCGAGCACCTGCTGCGGCTTCATTGGCACACCATCCATCCTTTACTTCCAATGCGTCTCCACCCCAGCAGAACCCACCCTTAACATCAGACCCTACAAGTACCATGGTGGAATCATCAGAGGTCTCTCATTCTGATCAGAGATCCCAACCTCACCTAATTGTCGATAAGCCCGCTGACGACGGCTTCAACTGGCGGAAATATGGGCAGAAGCAGGTGAAGGGCAGTGAATATCCTCGTAGCTACTACAAATGTACCCATCCAAATTGTCCTGTCAAGAAAAAGGTTGAGCGTTCTCTTGACGGCCAAGTAACTGAGATTATCTATAAGGGCCAACACAACCATCAACCACCTCAACCCAATAAGCGTGCAAAAGAAGGGGGGAACTCAAATGGAAATTTGAATTTGCGGGGGAATTCTGAAATGGGTTCCCAGGGTCACACTGGGAATTCGAGCAGATCAAATGAAATTGTAGCTGCTTCTTCAATGTCTATGAGGGATCAGGAATCTTGCCAGGCAACACCTGAGCAGTTATCTGGCTCAAGTGATGGTGAGGAAGTAGGTGGTGCTGAAACAAGAGTAGATGAAGGGGATGACGATGAGCCTGATCCGAAGAGAAGGAACACCGAGGTCAGGGTGTCCGAGCCAGCTTCTTCACAAAGGACAGTCACGGAACCTAGGATCATTGTGCAGACAACAAGTGAAGTCGATCTTTTGGATGATGGCTATAGGTGGCGCAAGTATGGGCAGAAAGTGGTCAAAGGGAATCCTCATCCAAGGAGCTACTATAAATGCACAAATGCGGGATGTAATGTACGTAAGCATGTTGAGAGGGCTTCAACAGATCCCAAAGCCGTCATTACAACATATGAGGGAAAACATAAGCACGATGTGCCAACAGCTAGGAGGAGCAGCCACAACACAGCCAACAGTAATGTACCCCAGCTAAAACCACAAAATGCTGTAGCTGAGAAGCATTCCTTGGTTAAAAAGATGGATTTCAGGAACAATGATCAGCAGCCTGTGGCACTTCTTCGATTAAAAGAAGAGGAAGTCGCGTAG 1587 0.4984 MAENNGISRATAPPRPTIVLPPRSSVENLFIGGAGASPGPMTLVSNFFSDNDPDSECRSFSQLLAGAMGSPVAVTGWRPSFLMENSPEGERDSGVRGEKDFRFKQNRPLGLVIAQSPMFTIPPGLSPASLLDSPGFFSPVQGPFGMSHQQALAQVTAQAVQSQSHMHIPAEYPSSLRAPAAASLAHHPSFTSNASPPQQNPPLTSDPTSTMVESSEVSHSDQRSQPHLIVDKPADDGFNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSLDGQVTEIIYKGQHNHQPPQPNKRAKEGGNSNGNLNLRGNSEMGSQGHTGNSSRSNEIVAASSMSMRDQESCQATPEQLSGSSDGEEVGGAETRVDEGDDDEPDPKRRNTEVRVSEPASSQRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTNAGCNVRKHVERASTDPKAVITTYEGKHKHDVPTARRSSHNTANSNVPQLKPQNAVAEKHSLVKKMDFRNNDQQPVALLRLKEEEVA* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01182 528 Gene3D WRKY domain 401 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 FunFam WRKY transcription factor 221 294 - -
Eupl04g01182 528 ProSiteProfiles WRKY domain profile. 409 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 MobiDBLite consensus disorder prediction 1 22 - -
Eupl04g01182 528 Pfam WRKY DNA -binding domain 235 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 Pfam WRKY DNA -binding domain 415 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 MobiDBLite consensus disorder prediction 284 356 - -
Eupl04g01182 528 MobiDBLite consensus disorder prediction 180 240 - -
Eupl04g01182 528 ProSiteProfiles WRKY domain profile. 235 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 MobiDBLite consensus disorder prediction 478 493 - -
Eupl04g01182 528 MobiDBLite consensus disorder prediction 225 239 - -
Eupl04g01182 528 MobiDBLite consensus disorder prediction 466 496 - -
Eupl04g01182 528 MobiDBLite consensus disorder prediction 278 401 - -
Eupl04g01182 528 FunFam WRKY transcription factor 33 401 467 - -
Eupl04g01182 528 SUPERFAMILY WRKY DNA-binding domain 406 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 131 494 IPR044810 GO:0003700
Eupl04g01182 528 SMART WRKY_cls 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 SMART WRKY_cls 414 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 MobiDBLite consensus disorder prediction 186 224 - -
Eupl04g01182 528 SUPERFAMILY WRKY DNA-binding domain 232 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g01182 528 Gene3D WRKY domain 224 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01182 Eupl-Chr4 18041559 18049550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01182 3 528 WRKY Transcription Factor Family AT2G03340 59.559 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl04g01182 WRKY 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01182 - - nnu:104598386 768.844