Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl04g01170 | ATGTCGGAAGAAGAAACCGATCCGTTCCGGTTTTGCGTAATCGTCTTCTTAATCCTGATTACAGGTCGGATTGTTGCGGAAGCTTCTTTACAGGCAGACAGGGAAGTTCTGCTGAAGCTCAAATCATTTCTTTTAGACGAGAATAAAGTGAATCGAGGCCGATACGCGGAATGGAGCGAACAGAGTTTATCTCCCTGTGGTTGGCTAGGAATCTCTTGCAACGGCGGAAGAGTCACAGAAATCAATCTATCTCGTTACAACATCTCTGGCAATATCTTTGGAAACTTCTCTCTTCTAACCGAACTTTCCAAATTGGATCTCTCCGAGAACACAATTAGTGGAGAAATTCCTGCTGATTTGAGTCTATGCAGTAACCTCAAGTATCTAAATCTATCTCACAATATGCTCGAAGGAGAGCTGAACTTGACTGGATTAAACAATCTAGAAACACTCGACCTGACTGTCAATAGATTCCAAGGTGGAATTCAATCGAATTTTCCGGCAATTTGCAACAAGTTAATCACTCTCAACATCTCGGCGAATAACTTGACCGGCGGGATTGATAATTGTTTCGACGAATGCTGGACATTGCAGTATCTCGATCTCAGCTCGAACAATTTCAGTGGACAGTTATGGTTAGGGTTCCCAAGGTTACGAGAGTTCACGGTTTCGGAGAATAAGCTCAGTGGGGAAGTCTCACCATCGATCTTTACTGAGAATTGCAATCTGGAAGTTCTGGATTTGTCGGAAAATCATTTCTATGGAAAAATTCCAAAAGAGGTTGCAAATTGCAGAGGTTTGCTTTCTTTGAATCTATGGGGGAACAATTTCACTGATCAGGTTCCAGCCGAGATTGGATCACTTTCAAATCTCGAAGTGTTGTTATTAGGAAGCAATAACTTATCAAGAGAGATTCCAGAACCACTCTTGAATTGCAGAAACTTAACGTTTTTAGATTTCAGCAAGAACGGATTTGGAGGAGATATACAAAATATCTTTGGAAGATTCGTGCAGGTGAAATTTCTTGTGTTGCATGGAAATTCATACACAGGAGGGATAAATTCTTCAGGGGTTCTCAGATTACCGAATGTTAGTCGATTAGACCTTAGCTTCAACAACTTCTCTGGTCCATTACCGGTAGAAATCTCCGAAATGCCGCGTTTACAGTTCTTGATGCTTGCATATAACCAATTCTCTGGCATGATACCACCAGAATTTGGAAATCTCTCAACTCTACAAGCACTTGATCTCTCCTTCAATAGGCTAACGGGAACAATACCTCCTCAAATTGGAAAACTAAAATCTCTCTTATGGTTGATGCTTGCGAACAATAATTTGACCGGAGAAATTCCACCAGAGATTGGAAATTGCGGCAGCCTATTGTGGGTGAATTTCGCCAACAACCAATTATTCGGAAAAATTCCACCTCAATTGTCGAATATTGGTAAGAACGTCACTCCAACATTCGAATTAAATAGGAAGAACGACAGAGTCATAGCCGGTTCTGGCGAGTGTTTGTCAATGAAACGGTGGATCCCAGCGGACTATCCGCCTTTCAGTTTTGTGTATGATCTCCTTACAAGGAAGAGGTGCCGAAGCATTTGGGATCAGTTACTTAAAGGCTACGGCATTTTCCCAATCTGTGTTGATGGTTCATCAGTCCGAACACTACAAATTTCTGGCTATCTTCAGCTCGTCGGAAATCAGTTTTCAGGTGAAGTCCCACCAGCAATTGGTCGGATGCTCAATTTCAGTCTCCTTCATTTGGGATTCAATAAATTCTCAGGCAGATTCCCACCAGAGATCAGACGGTTGCCACTCGTCGTTCTCAACATCACTTACAACAATTTTTCTGGTGAAATTCCACCGGAACTTGGACAACTCAAGTGCTTACAGAACCTCGATTTGTCCCACAACAATTTCTCCGGTGTGTTCCCAACAAGCTTGAACAGTTTGACTGATATGAACAAATTCAATGTTTCATTCAATCCTTTGATCTCCGGTGTAATTCCAACGACCGGGCAGCTAGCGACATTTGACCGTGACTCCTTCCTCGGAGACCCGCTCTTATACGTTCCATCTTTTCCAAACAACTCTGCAACAAGCTTGCTACCAGATAGGAAACCCGGCAGAAAGTCAAAAAAACTGACCAGCATAGCTGCATTTTTGGTGTTCTTAGTCCTAACTCTTGTTTTCATAGTCTGCGGAATTCTGTCGTTTGTACTGTTCATTGCCACTAAAACTCAGCCAGAACCGCCAGAGTTTCTGTTAGAAGATACTAAGTACCGGCATGACATGGTATCGAGCTCCAGTGGGTCATCGCCCTTATCGTCGGATATCGTGAAGGTCATTCGCCTGGATAAAACAGCATTTACATATGGAGATATTTTTAAGGCTACAGGGAACTTTTCAGATGAGAGAATTATCGGCAAGGGCGGATTTGGAACGGTGTACCATGGTGTATTGCCTGATGGAAGAGAAGTGGCAGTGAAGAAGCTACAGAGAGAAGGTTTTGAAGGGGAGAGAGAGTTTCGGGCTGAAATGGAGGTTTTAAGTGGTAGCGGTATCGGGTGGCCACACCCAAATCTAGTAACACTTTATGGATGGTGCCTGTATGGATCCGAGAAACTCTTGGTGTATGAGTACATGGAAGGTGGGAGCTTGGAGGATCTTGTGTCGGATAGGACAAGGTTGACATGGCGACGGCGTGTTGATGTGGCAATTGGCGTGGCACGCGCCTTAATGTTTCTGCACCATGAGTGTTTTCCAGCCATTGTGCACAGGGATGTGAAGGCTAGCAATGTGTTATTAGATAGGGAAGGGAAGGCACATGTGACGGATTTCGGTCTGGCTAGGGTGGTGGGTGCAGGAGAGAGCCATGTGAGCACAATAGTGGCTGGAACAGTAGGATATGTGGCTCCTGAGTATGGACATACATGGCAAGCAACAACAAAGGGCGATGTGTATAGCTTCGGAGTACTAGCAATGGAGTTGGCGACTGGGAGGCGAGCTGTTGACGGAGGGGAAGAGTGTCTGGTAGAATGGGCTAGACGGGTCATCGGAGACAGACGGAAAGGAATGAGCCAAGTGATTCCAGTGGTAATTCTTGGATCTGGGCTTGCTGAGGGAGCAGAGGAAATGTGTGAGTTACTAAAGATCGGTCTGCGCTGCATTGCAGAAACACCACAGGCTAGACCAAATATGAAGGAGGTGCTAGCAATGTTGATTAAGATTTCCGGCAACAGCGATGATTTCGGTGACGAGTCTTCTCCCCCAGTTTAA | 3282 | 0.4452 | MSEEETDPFRFCVIVFLILITGRIVAEASLQADREVLLKLKSFLLDENKVNRGRYAEWSEQSLSPCGWLGISCNGGRVTEINLSRYNISGNIFGNFSLLTELSKLDLSENTISGEIPADLSLCSNLKYLNLSHNMLEGELNLTGLNNLETLDLTVNRFQGGIQSNFPAICNKLITLNISANNLTGGIDNCFDECWTLQYLDLSSNNFSGQLWLGFPRLREFTVSENKLSGEVSPSIFTENCNLEVLDLSENHFYGKIPKEVANCRGLLSLNLWGNNFTDQVPAEIGSLSNLEVLLLGSNNLSREIPEPLLNCRNLTFLDFSKNGFGGDIQNIFGRFVQVKFLVLHGNSYTGGINSSGVLRLPNVSRLDLSFNNFSGPLPVEISEMPRLQFLMLAYNQFSGMIPPEFGNLSTLQALDLSFNRLTGTIPPQIGKLKSLLWLMLANNNLTGEIPPEIGNCGSLLWVNFANNQLFGKIPPQLSNIGKNVTPTFELNRKNDRVIAGSGECLSMKRWIPADYPPFSFVYDLLTRKRCRSIWDQLLKGYGIFPICVDGSSVRTLQISGYLQLVGNQFSGEVPPAIGRMLNFSLLHLGFNKFSGRFPPEIRRLPLVVLNITYNNFSGEIPPELGQLKCLQNLDLSHNNFSGVFPTSLNSLTDMNKFNVSFNPLISGVIPTTGQLATFDRDSFLGDPLLYVPSFPNNSATSLLPDRKPGRKSKKLTSIAAFLVFLVLTLVFIVCGILSFVLFIATKTQPEPPEFLLEDTKYRHDMVSSSSGSSPLSSDIVKVIRLDKTAFTYGDIFKATGNFSDERIIGKGGFGTVYHGVLPDGREVAVKKLQREGFEGEREFRAEMEVLSGSGIGWPHPNLVTLYGWCLYGSEKLLVYEYMEGGSLEDLVSDRTRLTWRRRVDVAIGVARALMFLHHECFPAIVHRDVKASNVLLDREGKAHVTDFGLARVVGAGESHVSTIVAGTVGYVAPEYGHTWQATTKGDVYSFGVLAMELATGRRAVDGGEECLVEWARRVIGDRRKGMSQVIPVVILGSGLAEGAEEMCELLKIGLRCIAETPQARPNMKEVLAMLIKISGNSDDFGDESSPPV* | 1094 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl04g01170 | 1093 | Gene3D | Phosphorylase Kinase; domain 1 | 767 | 882 | - | - | |
Eupl04g01170 | 1093 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 764 | 882 | - | - | |
Eupl04g01170 | 1093 | SMART | serkin_6 | 803 | 1077 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Eupl04g01170 | 1093 | Pfam | Leucine rich repeat N-terminal domain | 31 | 74 | IPR013210 | - | |
Eupl04g01170 | 1093 | Pfam | Leucine rich repeat | 147 | 207 | IPR001611 | GO:0005515 | |
Eupl04g01170 | 1093 | SUPERFAMILY | L domain-like | 562 | 705 | - | - | |
Eupl04g01170 | 1093 | CDD | STKc_IRAK | 809 | 1078 | - | - | |
Eupl04g01170 | 1093 | Pfam | Leucine Rich repeat | 410 | 424 | IPR001611 | GO:0005515 | |
Eupl04g01170 | 1093 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 925 | 937 | IPR008271 | GO:0004672|GO:0006468 | |
Eupl04g01170 | 1093 | SUPERFAMILY | RNI-like | 62 | 282 | - | - | |
Eupl04g01170 | 1093 | ProSiteProfiles | Leucine-rich repeat profile. | 125 | 146 | IPR001611 | GO:0005515 | |
Eupl04g01170 | 1093 | FunFam | Leucine-rich repeat receptor-like protein kinase | 883 | 1085 | - | - | |
Eupl04g01170 | 1093 | SUPERFAMILY | Protein kinase-like (PK-like) | 780 | 1076 | IPR011009 | - | |
Eupl04g01170 | 1093 | SUPERFAMILY | L domain-like | 215 | 476 | - | - | |
Eupl04g01170 | 1093 | Pfam | Protein kinase domain | 804 | 1073 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Eupl04g01170 | 1093 | ProSitePatterns | Protein kinases ATP-binding region signature. | 809 | 832 | IPR017441 | GO:0005524 | |
Eupl04g01170 | 1093 | Gene3D | Ribonuclease Inhibitor | 544 | 702 | IPR032675 | - | |
Eupl04g01170 | 1093 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 241 | 1077 | - | - | |
Eupl04g01170 | 1093 | Gene3D | Ribonuclease Inhibitor | 214 | 356 | IPR032675 | - | |
Eupl04g01170 | 1093 | Gene3D | Ribonuclease Inhibitor | 357 | 498 | IPR032675 | - | |
Eupl04g01170 | 1093 | Gene3D | Ribonuclease Inhibitor | 143 | 213 | IPR032675 | - | |
Eupl04g01170 | 1093 | Gene3D | Ribonuclease Inhibitor | 32 | 142 | IPR032675 | - | |
Eupl04g01170 | 1093 | Gene3D | Transferase(Phosphotransferase) domain 1 | 883 | 1088 | - | - | |
Eupl04g01170 | 1093 | ProSiteProfiles | Protein kinase domain profile. | 803 | 1078 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Eupl04g01170 | 1093 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 336 | 497 | - | - | |
Eupl04g01170 | 1093 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 237 | 329 | - | - | |
Eupl04g01170 | 1093 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 48 | 236 | - | - | |
Eupl04g01170 | 1093 | SMART | LRR_typ_2 | 99 | 123 | IPR003591 | - | |
Eupl04g01170 | 1093 | SMART | LRR_typ_2 | 628 | 651 | IPR003591 | - | |
Eupl04g01170 | 1093 | SMART | LRR_typ_2 | 409 | 432 | IPR003591 | - | |
Eupl04g01170 | 1093 | SMART | LRR_typ_2 | 433 | 457 | IPR003591 | - | |
Eupl04g01170 | 1093 | SMART | LRR_typ_2 | 288 | 312 | IPR003591 | - | |
Eupl04g01170 | 1093 | SMART | LRR_typ_2 | 385 | 408 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl04g01170 | Eupl-Chr4 | 17877625 | 17881952 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl04g01170 | 317 | 665 | Receptor kinase-like Gene Family | AT1G55610 | 26.271 | 2.73e-07 | 53.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-2 | Eupl04g01170 | Pkinase | 1.5e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl04g01170 | - | - | tcc:18604765 | 1533.47 |