LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl04g01156	ATGAAAAGAGAGAAACATGGGGCAAGGCTGCCTCAATCCATCTCCTCCCTTCTCCTTCTCATTCTCCTCCTACTTAACTTTACAGCCCCAACTGCAGCAAGAGGTGGTAGTTCTTCATCTTCTTCTTCTTACACTCCGGAGGACAATTATCTCATTGACTGTGGTGCACCCCAAGGCACTAAGCTTGATGATGGTCGGACCTTCCGATCAGATTCTCAATCCGCTTCTTTTCTCTCTACTGATGAGGACGTACAAGCCTCCGTGACCTCCATCCCCACCAACGTTTCTTCTTCTTCCTCTCCTTTATATCTTACAGCAAGAGTGTTTCCCGAGGAATCAACATACAGCTTCTTTATCTCCCACCAAGGTCGACACTGGCTCCGTCTCTACTTCTACCCGCTTTCCCACCCATTTTATAATCTAACAAGTGCTGTCTTCTCTGTCACCACCGATAATTTTGTCCTCTTGCATGATTTCTCAGTTCCTGATAATACTTCAATGGTGTTCAAGGAGTATCTCATTACCATCACCTCTGATAGATTCTCACTCAAATTCTCACCCAAGAAAAATTCTGTCTCATTCATCAATGCTATTGAATTTGTTTCCGCCCCTGACTCACTCATCTCTGACTCAGCCTCTGCAGTTTTTCCGGTTGGCGATTTCATGGGTTTGTCTAACTACGCACTCCAGGTATCTCACCGGTTGAATGTTGGAGGCCCACCTATAATGCCCAAGAACGACACTCTGGGAAGGACTTGGCATTCTGATAACGGGTTTATGAAGTTTCCGGAAGCAGCCCAGAATGTATCTGTTGCTCCAAATGTTGTTAAATACCTGAAGCACGGTGCCAGCCCGCTCATAGCACCTAATTGGGTGTACGCGTCAGCAGATATGATGGCTGATTCGGGTGTTGTCGACCCGAATTTCAACCTCACTTGGGAGATGAACGTCGACCCGAGTTTCTCTTATTTGATCCGAATGCACTTCTGTGATATTGTGAGTAAGAGCCTCAATGATCTCTACTTCAATGTCTATGTCAATGGAAAGATGGGTGTGTCAAGTCTCGACCTCTCGACTCTTACCTCTGGGCTTGCTGTTGCTTATTACAAGGATTTTGTGCTCAATGCCTCGGCTATCTCTAATGGCACAATTCGGGTTCAGGTTGGCCCGGCTTCTAGTGTTGAATCAGGCATGCCGAATGCTATTCTTAATGGTCTTGAGGTTATGAAGATGAGTAACGCAGCTAGAAGTTTGGACGGGTTGTTCTCTATTGATGGGTCTTATAAAGGACCAAATACGGCGACCACTAAGATGAAAATTGTTGCAGCTGTGGGTCTTGTCATGGGTGTCACTGCAATGTTGTTACTTGGGACGGTTTTTATCCGTTGGCAAAAGAGGCCTCAAGACTGGGACAAGCGCAACAGTTTCTCATCATGGCTTCTTCCTCTCCACGCAAACCACTCTAGCTTCATGTCCAGTAAGAGTGGGTCACGTGGGTCTCATCGATTTGGTTCACACAAGAGCAAGAATGGTTACTCAGGCTTCTACTCCTCCGCACTTGGACTAGGCCGGTTCTTCACCTTTGCTGAGTTGCAAGAAGCAACACACAGCTTCGATGAAAAGGCTGTGATAGGAGTTGGAGGATTTGGTAAGGTGTACCTTGGCGAGCAAGAAGATGGGACTAAGCTTGCTATTAAGCGCGGCAATGCGAGTTCCGAGCAAGGAATCAATGAGTTCCAGACAGAGATACAGATGCTCTCAAAGCTCCGGCATCGCCATCTCGTATCGCTTATTGGATACTGTGATGAACAGTCAGAGATGATCCTTGTTTATGAGTACATGTCGAATGGCCCACTTCGTGATCACCTCTATGGATCTACACTCCCTCATTTGTCATGGAAACAACGACTCGAGATCTGCATTGGCTCGGCCCGTGGGCTACACTATCTTCATACCGGCGCGGCGCAGGGTATCATTCATCGTGATGTCAAGACCACCAACATCCTCCTTGATGAGAATTTAGTTGCTAAGGTTTCTGATTTTGGTCTCTCCAAAACTGCACCTACATTGGATCAAACACATGTTAGCACTGCTGTGAAGGGTAGCTTTGGGTACCTAGACCCGGAGTATTTTAGGAGGCAGCAACTGACTGAGAAGTCTGATGTTTACTCATTTGGGGTAGTTCTTTTTGAGGTCTTGTGTGCAAGACCAGCCATCAATCCTGCACTGCCGAGGGAGCAGGTTAACTTGGCTGAGTGGGCGATGCAGTGGCACAGGAAGGGTTTGCTTGAGAAGATAATCGACCCCAATCTCATTGGAACTATAAGCTCAGGTTCACTGAAGAAGTATGTGGAAGCAGCAGAGAAGTGTTTGGCAGATTATGGTGTCGATAGGCCATCCATGGGAGATGTGCTGTGGAACTTGGAGTATGCTTTACAGCTCCAGGAGGCTTCTTCAGAGCTTGATCCTCCTGATGATAAAAGCTCGAAGCTCATCGCTTTGGAACGGCCAACTGGTAAGGCCGACTCCAACGGGGCTCCGACTATTCCCATTAATGATAACTCTGGAGTAAGTGTTGGGTCTCCTTTGTTTTCTCAGATTGGGGGATTTCAAGGAAGGTGA	2622	0.471	MKREKHGARLPQSISSLLLLILLLLNFTAPTAARGGSSSSSSSYTPEDNYLIDCGAPQGTKLDDGRTFRSDSQSASFLSTDEDVQASVTSIPTNVSSSSSPLYLTARVFPEESTYSFFISHQGRHWLRLYFYPLSHPFYNLTSAVFSVTTDNFVLLHDFSVPDNTSMVFKEYLITITSDRFSLKFSPKKNSVSFINAIEFVSAPDSLISDSASAVFPVGDFMGLSNYALQVSHRLNVGGPPIMPKNDTLGRTWHSDNGFMKFPEAAQNVSVAPNVVKYLKHGASPLIAPNWVYASADMMADSGVVDPNFNLTWEMNVDPSFSYLIRMHFCDIVSKSLNDLYFNVYVNGKMGVSSLDLSTLTSGLAVAYYKDFVLNASAISNGTIRVQVGPASSVESGMPNAILNGLEVMKMSNAARSLDGLFSIDGSYKGPNTATTKMKIVAAVGLVMGVTAMLLLGTVFIRWQKRPQDWDKRNSFSSWLLPLHANHSSFMSSKSGSRGSHRFGSHKSKNGYSGFYSSALGLGRFFTFAELQEATHSFDEKAVIGVGGFGKVYLGEQEDGTKLAIKRGNASSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDEQSEMILVYEYMSNGPLRDHLYGSTLPHLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKTAPTLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPAINPALPREQVNLAEWAMQWHRKGLLEKIIDPNLIGTISSGSLKKYVEAAEKCLADYGVDRPSMGDVLWNLEYALQLQEASSELDPPDDKSSKLIALERPTGKADSNGAPTIPINDNSGVSVGSPLFSQIGGFQGR*	874

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl04g01156	873	FunFam	Receptor-like protein kinase FERONIA	228	413	-	-
	Eupl04g01156	873	SMART	serkin_6	538	811	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl04g01156	873	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	658	670	IPR008271	GO:0004672\|GO:0006468
	Eupl04g01156	873	FunFam	Receptor-like protein kinase FERONIA	614	828	-	-
	Eupl04g01156	873	Gene3D	Transferase(Phosphotransferase) domain 1	614	830	-	-
	Eupl04g01156	873	Gene3D	-	228	413	-	-
	Eupl04g01156	873	Gene3D	-	47	203	-	-
	Eupl04g01156	873	CDD	STKc_IRAK	544	809	-	-
	Eupl04g01156	873	Gene3D	Phosphorylase Kinase; domain 1	506	613	-	-
	Eupl04g01156	873	Pfam	Malectin-like domain	52	411	IPR024788	-
	Eupl04g01156	873	MobiDBLite	consensus disorder prediction	817	854	-	-
	Eupl04g01156	873	FunFam	Putative receptor-like protein kinase	49	204	-	-
	Eupl04g01156	873	FunFam	receptor-like protein kinase FERONIA	501	613	-	-
	Eupl04g01156	873	Pfam	Protein tyrosine and serine/threonine kinase	542	735	IPR001245	GO:0004672\|GO:0006468
	Eupl04g01156	873	SUPERFAMILY	Protein kinase-like (PK-like)	519	809	IPR011009	-
	Eupl04g01156	873	ProSitePatterns	Protein kinases ATP-binding region signature.	544	566	IPR017441	GO:0005524
	Eupl04g01156	873	PANTHER	OS07G0166700 PROTEIN	524	815	IPR045272	GO:0004714\|GO:0006468
	Eupl04g01156	873	ProSiteProfiles	Protein kinase domain profile.	538	811	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl04g01156	Eupl-Chr4	17645948	17649025	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl04g01156	40	850	Receptor kinase-like Gene Family	AT5G61350	67.153	0.0	1126

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Eupl04g01156		Malectin_like	1.4e-41	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl04g01156	-		-	vvi:100258753	1290.02