Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01141 ATGAGTGGAAAGGAAGGACATTCGGATGAATCGGGGGGGAGCGGGTCGTCGTCTTCGTCGGCGACTCAGGGAAACTCAGCCGCGGTGACGGAGAAGCAGAAGGAGAAGGCTCGGGTGAGCAGGACGTCGCTCATCCTCTGGCATGCCCACCAGAACGACTTTGCTGCCGTCCGGAAGCTTCTGGAAGAAGATCGCTCTCTCGTTTTTGCCAGGGATTACGACAACAGGACTCCTCTACATGTCGCTTCCCTCCACGGTTGGATCGACGTCGCTAAATGCCTTATTGAATATGGCGCCGATGTCAACGCCCAGGATCGCTGGAAGAACACACCCCTAGCTGATGCTGAAGGAGCTAAGAAACATAAAATGATCGAGTTGTTGAAATCATATGGTGGCTTGTCTTTTGGACAAAATGGCAGCCATTTTGAGCCAAAGCCAGTTCCACCCCCTCTCCCAAACAAGTGTGACTGGGAAATTGACCCTTCTGAGCTGGATTTCTCAAACTCAAGTTTTATTGGAAAGGGGTCTTTTGGGGAAATTTTGAAAGCTTCTTGGCGTGGAACACCAGTAGCTATCAAACGCATTCTTCCATCTCTTTCAGATGATAGATTGGTGATCCAGGACTTCAGGCACGAGGTCAATTTGCTTGTGAAGCTGCGCCACCCCAATATTGTCCAATTTCTTGGAGCAGTCACTGAGAAGAAGCCCCTAATGTTAATTACTGAGTATCTGCGAGGGGGTGATCTCCATCAGCACCTTAAGGAAAAGGGTTCACTTAATCCATCTACAGCTATTAACTTTGCGTTAGACATTGCCAGGGGCATGGCTTATCTCCATAATGAGCCAAATGTCATAGTTCACCGAGATCTAAAGCCAAGGAATGTTCTTTTGGTCAACTCCAGTGCAGACCATTTGAAGGTTGGAGACTTTGGATTAAGCAAGCTCATCAAGGTTCAGAACTCTCACGATGTGTACAAAATGACCGGAGAGACTGGAAGCTACCGGTATATGGCTCCTGAAGTCTTCAAGCATCGAAAATATGATAAGAAGGTTGATGTTTTCTCTTTTGCAATGATATTATACGAGATGCTTGAAGGGGATCCACCATTGGCAAATTATGAACCTTATGAAGCAGCAAAATGTGTGGCAGATGGACAGAGACCCTCGTTTCGTGCAAAAGGCTACCTTCCTGAACTGAAAGAGCTGACGGAGCACTGCTGGGATGCTGACATGAACCAGAGACCTTCTTTTCTAGAGATCCTCAAGAAGCTCGAAAAGATTAAGGAGAGCCTAACAACAGATCATCACTGGAACATCTTTAACGCATAA 1329 0.471 MSGKEGHSDESGGSGSSSSSATQGNSAAVTEKQKEKARVSRTSLILWHAHQNDFAAVRKLLEEDRSLVFARDYDNRTPLHVASLHGWIDVAKCLIEYGADVNAQDRWKNTPLADAEGAKKHKMIELLKSYGGLSFGQNGSHFEPKPVPPPLPNKCDWEIDPSELDFSNSSFIGKGSFGEILKASWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQHLKEKGSLNPSTAINFALDIARGMAYLHNEPNVIVHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKCVADGQRPSFRAKGYLPELKELTEHCWDADMNQRPSFLEILKKLEKIKESLTTDHHWNIFNA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01141 442 SMART serkin_6 166 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01141 442 Gene3D Transferase(Phosphotransferase) domain 1 246 439 - -
Eupl04g01141 442 ProSiteProfiles Ankyrin repeat region circular profile. 74 106 - -
Eupl04g01141 442 SUPERFAMILY Ankyrin repeat 45 131 IPR036770 -
Eupl04g01141 442 PIRSF ILK 2 442 - -
Eupl04g01141 442 FunFam serine/threonine-protein kinase STY46-like 159 245 - -
Eupl04g01141 442 MobiDBLite consensus disorder prediction 7 30 - -
Eupl04g01141 442 ProSiteProfiles Protein kinase domain profile. 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01141 442 SMART ANK_2a 74 103 IPR002110 GO:0005515
Eupl04g01141 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Eupl04g01141 442 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 431 - -
Eupl04g01141 442 SUPERFAMILY Protein kinase-like (PK-like) 163 436 IPR011009 -
Eupl04g01141 442 Pfam Ankyrin repeats (3 copies) 35 105 IPR002110 GO:0005515
Eupl04g01141 442 Pfam Protein tyrosine and serine/threonine kinase 170 424 IPR001245 GO:0004672|GO:0006468
Eupl04g01141 442 Gene3D - 12 139 IPR036770 -
Eupl04g01141 442 CDD STKc_MAP3K-like 172 424 - -
Eupl04g01141 442 FunFam Integrin-linked protein kinase family 245 440 - -
Eupl04g01141 442 ProSitePatterns Protein kinases ATP-binding region signature. 172 193 IPR017441 GO:0005524
Eupl04g01141 442 ProSiteProfiles Ankyrin repeat profile. 74 106 IPR002110 GO:0005515
Eupl04g01141 442 Gene3D Phosphorylase Kinase; domain 1 151 245 - -
Eupl04g01141 442 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01141 Eupl-Chr4 17452795 17464261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01141 11 442 MAP Kinase Kinase Kinase AT1G14000 82.870 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Eupl04g01141 PK_Tyr_Ser-Thr 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01141 - - egr:104433430 770.77