Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01120 ATGGAAGGAAGAAGGAGCTCTGATCTTCCTCCTGGCTTTAGGTTTCATCCAACAGATGAGGAATTGATCACTTATTATCTTAAAAATCAAGCGACATCGAAGCCATGCCCCGTATCGATGATCCCGGAAGTCGATATTTATAAATTCGATCCGTGGGAATTGCCTGGGAAGGCGGAATTTGGCGAGGACGAATGGTATTTTTTTAGTCCACGAGATCGGAAATACCCGAATGGTGTGCGACCTAATCGCGCAACAACGTCGGGTTATTGGAAAGCCACAGGCACAGACAAGGCCATCCATAGCGGGTCCAAGTATGTTGGGGTGAAGAAAGCTCTTGTGTTTTACAAGGGTAGGCCGCCGAAGGGCGTTAAGACGGATTGGATCATGCATGAATATCGGTTGGGTGATTCAAGGATACAACCCTCTAAGCCGAATGGGTCTATGAGGTTGGATGATTGGGTCCTCTGCAGGATCTACAAGAAGAGGCATTTGGGAAGAAATGTAGAGCAAAAGGAGGATTCATGTATCAAAAACACGATAACGATGAAAGCAGATGTTAACGATCAACAAGAATCAAAATTTCCTAGAACGTTTTCGCTCGCGCATCTGCTGGAGGTCGAATACATGTCAATTGCTCACCTTTTAAGTGATAATCCTTTCAATTCAACAGTAGAGTGCGACAACAAAAACGACGATCAAGACACGGAAACGTTTCTATCGGCCGACATGGCTTACCAATTTGCAAATTCAGCAAAGTTCCAAGTGAACCAGAATGCTCTCTTCAATCAACAAATATTTGTCAACCCAGTACTTGATTTTCAGTGA 825 0.4424 MEGRRSSDLPPGFRFHPTDEELITYYLKNQATSKPCPVSMIPEVDIYKFDPWELPGKAEFGEDEWYFFSPRDRKYPNGVRPNRATTSGYWKATGTDKAIHSGSKYVGVKKALVFYKGRPPKGVKTDWIMHEYRLGDSRIQPSKPNGSMRLDDWVLCRIYKKRHLGRNVEQKEDSCIKNTITMKADVNDQQESKFPRTFSLAHLLEVEYMSIAHLLSDNPFNSTVECDNKNDDQDTETFLSADMAYQFANSAKFQVNQNALFNQQIFVNPVLDFQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01120 274 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Eupl04g01120 274 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 227 - -
Eupl04g01120 274 FunFam NAC transcription factor 18 165 - -
Eupl04g01120 274 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Eupl04g01120 274 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Eupl04g01120 274 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01120 Eupl-Chr4 17081272 17082747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01120 1 230 NAC Transcription Factor Family AT1G69490 64.082 3.01e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl04g01120 NAM 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01120 - - mof:131144912 400.593