Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01119 ATGGAAAACGTTTCTGTGCTTAGTAATGGAGATGAACAATTGGATATGCCTCCGGGTTTCCGATTCCATCCCACTGATGAAGAGCTTATAACTCACTACCTTTCCAAGAAGGTACTTGATTGCAGCTTCTATGCAAGAGCAATAGGTGAGGTGGATTTGAATAAGTGTGAGCCTTGGGATTTGCCATGGAGAGCTAAAATGGGGGAGAAGGAGTGGTATTTCTTCTGTGTGAGAGATAGAAAATACCCAACTGGTTTAAGGACAAACAGGGCCACTGAGGCTGGTTATTGGAAAGCTACAGGGAAAGATAAGGAGATTTACAGGGTAAAAACACTTGTTGGAATGAAGAAAACTCTGGTTTTTTACAAAGGGAGGGCTCCAAAAGGAGAGAAAAGCAACTGGGTCATGCATGAGTACAGGTTAGAGGGAAAATACTCTCTCTACAACCTCCCCAAAACAGCTAAGAATGAATGGGTGCTTTGCAGGATATTTCAAAAGAGTTCAAGTGGGAAGAAAATTCATGTTTCGGGGATGATGAAGCTGGGCCCCTTTGGAGATGAATTGGGCTCTTCACTTTTGCCTCCATTGATGGATTCTTCTCCCTACAGCGGCAACACCAAACCTGTTGCAGCTGAAACAGCTCACGTGACCTGCTTCTCCAACGCAATGGAGGTCCAGAAAAACCAGGAAGAGATGATTGAGAGCTTCAATTCTCCTCTTTTCTCTTCTTCTGCAAACCCTTCTGATTTCTCACCATTGATTTTCTCCAAAATATCTCTACCAAATTCATTCTACTCCACTCAAACTCCTCCAAATCTAGCCAATTTGCAATACCCAGGTTCTGTTTTAGTGCAAGATCAAGCCTTCCTAAGGTCTTTACTAGAAAACCATGGATCAACCATGAAACAGAGTTGCAAACCAGAGAGGGACATGGTTAGCTTCTCACAAGAAACAGGCCTAACTACTGATATGAACACTGAAATCTCTTCAGTTGTATCGAATCATGAAATGTGTCGGCGATCTTTCGAAGATCAAGAGGACCCATCTACTTCAGCAGGACCTGTAGACCTTGATTGTCTGTGGAATTATTGA 1092 0.4295 MENVSVLSNGDEQLDMPPGFRFHPTDEELITHYLSKKVLDCSFYARAIGEVDLNKCEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRVKTLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKYSLYNLPKTAKNEWVLCRIFQKSSSGKKIHVSGMMKLGPFGDELGSSLLPPLMDSSPYSGNTKPVAAETAHVTCFSNAMEVQKNQEEMIESFNSPLFSSSANPSDFSPLIFSKISLPNSFYSTQTPPNLANLQYPGSVLVQDQAFLRSLLENHGSTMKQSCKPERDMVSFSQETGLTTDMNTEISSVVSNHEMCRRSFEDQEDPSTSAGPVDLDCLWNY* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01119 363 FunFam NAC domain-containing protein 100-like 25 170 - -
Eupl04g01119 363 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Eupl04g01119 363 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Eupl04g01119 363 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Eupl04g01119 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 265 - -
Eupl04g01119 363 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01119 Eupl-Chr4 17070109 17072165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01119 14 363 NAC Transcription Factor Family AT5G07680 57.714 1.38e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl04g01119 NAM 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01119 - - ming:122062439 593.193