Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01103 ATGGCAACGATCACAACACAAGCTTCTCTTGCCGTGTTCCGGCTATGTACATCGCAATCGAGGTTCCTCACTGGGTCTTCAGGCAAACTCGCTAGACAATTCTCCGTCAAAACTAACGCCGCGTCGTCGTCGTCCAGTTCCTTCAAAATTGAAGCCAAGAAGGGTGAATGGTTGCCGGGTTTAGCCTCGCCAGGGTATCTGGATGGCAGCCTCCCTGGTGACAATGGGTTTGATCCTCTTGGACTCGCCGAGGACCCTGAGAACTTGAAATGGTTCGTCCAGGCCGAGCTCGTTAATGGGCGATGGGCCATGTTGGGTGTTGCAGGAATGCTGTTGCCAGAGGTCTTCACTAAGATCGGAATAATCGATGTGCCAAAATGGTATGATGCGGGGAAAGCCGAATACTTCGCGTCGTCTTCGACCCTTTTTGTGATCGAGTTCATCCTGTTCCATTACGTAGAGATCAGAAGGTGGCAAGATATAAAGAACCCAGGAAGCGTTAACCAAGATCCTATCTTCAAGAACTACTGCTTGCCTCCAAATGAGGTCGGATACCCTGGTGGCATCTTTAACCCACTCAACTTTGCGCCTACTCTTGAGGCCAAGGAGAAGGAGATTGCCAATGGGAGATTGGCAATGTTGGCATTCTTGGGGTTTGTGATCCAACACAATGTGACTGGGAAAGGACCATTTGACAACCTTCTAGAGCACATCTCTGACCCATGGCACACCACCATTGTTCAAACATTCAATGGTGCTTAA 762 0.4961 MATITTQASLAVFRLCTSQSRFLTGSSGKLARQFSVKTNAASSSSSSFKIEAKKGEWLPGLASPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIIDVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKNYCLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFVIQHNVTGKGPFDNLLEHISDPWHTTIVQTFNGA* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01103 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 27 249 IPR001344 GO:0009765|GO:0016020
Eupl04g01103 253 FunFam Chlorophyll a-b binding protein, chloroplastic 64 243 - -
Eupl04g01103 253 Gene3D Chlorophyll a/b binding protein domain 64 243 - -
Eupl04g01103 253 Pfam Chlorophyll A-B binding protein 64 223 IPR022796 -
Eupl04g01103 253 SUPERFAMILY Chlorophyll a-b binding protein 54 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01103 Eupl-Chr4 16857884 16860796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01103 43 251 Chloroplast and Mitochondria Gene Families AT3G61470 53.488 2.59e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01103 K08910 - nnu:104598101 466.848