Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01101 ATGATAATTAGTCTGCAAGTCCCTCCTCAAATCCTAGCGCCTCACTTCTCACAACACCCCTCACCCAAACCTCCAAAAAACCCTAACCCTAGAAGACATTCCCAACTTCTCCAAGGTTTCACCCCTCTAAAAACCCGAACCTCCTCCACTCCTCTCCTCACCAACCCCGGCTCCGACTGCGGCCTTCTCTTCCGCGAAAAGCTCATCTACCTCGAGAAACTCAACGTCGACTCCACCAAAGCCCTCGAGAAAAACCCAAATTTCCGCTCCGGCTCTCTCGACTCCGTTAAATCCGTCGAGAAATGCCTCTACTCGATGGGCATCGAACGGTCCGATATTGGCCGGATCTTCGGCATGCACCCTCAGCTCCTCACCTGCGACGTCTACACCGATCTTTACCCCGTCTTCGATTTCCTCCTCAACGACGTTAAAGTCCCTTACGGGGATATTCGGAAATCTATAATTCGGTGCCCCAGATTGTTAATGTGCAGCGTCCGGGACCAATTGAAGCCGACACTGTATTTTCTCCGGAGGTTAGGGTTTGTGGGACTGCACGGAATTACTTGCCAGACGACTTTGCTTCTGGTGTCAAGCGTCGAGGCCACGCTTGTACCTAAGCTTGATTATCTCCAGAGTTTGGGATTTTCGTATAGAGAGGCGGTTAAGATGGTTTTGAGATCTCCAGGGCTGTTGACGTTCAGCATTTCAAATAATTTTCGCCCCAAGGTGGAGTATTTCTTGAATGAGATGAAGGGGGATTTGGTGGAGTTGAAAAGGTTTCCTCAGTACTTCTCATTTAGCTTGGAGGGGAAAATAAAGCCTAGGCATCGTCTATTGGTCGAGCATGGGTTCTCTCTACCGTTGTCAGAGATGTTGAAGGTTAGTGAGGGGGAATTCAATGACCGGTTGGTCGAGATGAGATTGTGGTCTGTTCATGAGAAATTGTCGTTATGCGTGAGAAACAAATGCAAAAGGAATCTGGTGAAAGAGGGGTAG 996 0.491 MIISLQVPPQILAPHFSQHPSPKPPKNPNPRRHSQLLQGFTPLKTRTSSTPLLTNPGSDCGLLFREKLIYLEKLNVDSTKALEKNPNFRSGSLDSVKSVEKCLYSMGIERSDIGRIFGMHPQLLTCDVYTDLYPVFDFLLNDVKVPYGDIRKSIIRCPRLLMCSVRDQLKPTLYFLRRLGFVGLHGITCQTTLLLVSSVEATLVPKLDYLQSLGFSYREAVKMVLRSPGLLTFSISNNFRPKVEYFLNEMKGDLVELKRFPQYFSFSLEGKIKPRHRLLVEHGFSLPLSEMLKVSEGEFNDRLVEMRLWSVHEKLSLCVRNKCKRNLVKEG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01101 331 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 SMART mt_12 79 109 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 SMART mt_12 185 216 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 SMART mt_12 221 253 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 SMART mt_12 114 146 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 Gene3D Transcription termination factor 3, mitochondrial 63 314 IPR038538 -
Eupl04g01101 331 MobiDBLite consensus disorder prediction 13 34 - -
Eupl04g01101 331 PANTHER CGI-12 PROTEIN-RELATED 63 305 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 Pfam mTERF 146 299 IPR003690 GO:0003690|GO:0006355
Eupl04g01101 331 Pfam mTERF 102 178 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01101 Eupl-Chr4 16817229 16830670 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl04g01101 mTERF 3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01101 K15031 - nnu:104598104 493.426