Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01096 ATGGGTCTACACAGAATGCAAAACCAAGACATGGGGTTGGTTCTGTCCACTGATGCAAAGCCCAGGCTAAGATGGACTACAGAACTTCACCAGCGATTTGTCGAAGCCGTTACTCAGCTTGGAGGAGCAGAGAAGGCAACACCAAAGAGTCTGATGCGGATGATGGGTGTTCCTGAACTAACTCTATACCACCTAAAGAGCCACTTACAGAAATACAGGCTCGGGAAGAACCAACAATCAGAAACTTGCAGTGACATTAAGCAAGAAGATTTCACAGAGGTAGATTACAGAGAGAGTGAGATCAGAGGTGGCCATATCAGTGGGGAAATCATGGGTAGAACCCACAAACAGATTAATGAAAGCTTGCAGATAGCTCAAGCTCTACAGATGCAAATGGAGGTGCAGAAGAAACTCCATGAACAAATTGAGGTGCAGAGACATTTGCAGCTGCGAATTGAAGCTCAAGGGAAGTATTTACAGTCGATATTAAAGAAAGCACAAGAAACACTTGCTGGATATAATTCTTCTTCAATGGGACTCGAAGCTGCAAAAGCCGAATTATCTGAATTGGTCTCCATGGTGGACACCCGATGCTCAAGTGCTTCATTATCAGGGTTAACAGAAATAGGAGGCCTTAGCTTAATAATTGAAGGGAAGAGATCCATGAGAGGCGCAGATTGCTCCATGGATAGCTCATTAACTTCCTCTGAAAGCTCTGGAAGAAAGGATGAGAAGCTACAAAAGCTAGAGAGTGGAGACAACCATGAATATACCAGAACTTCTGCTGTGCTTCCATTAGTGGAAATTGATCCAAATGGAAGTAGTCATTGCAAGACCGGTTCGAGCTCCCGAGTTGGAGGGAGAAAGAGAAGTGGGAGCACAATTTCTGATGAGACTTGTGTTGAACAGCCATCCACTAAAAGATCATCACCCCATCAAGAGAAACCTGTTAACGAGTTTAGAAAGTTGGGATTATCAGAGGAGCTTGATCTGAACAGGAAGTATCCGAACGAAATGGATTCAGGTTGGCAAGGACTTGACTTGAACTGTAGGGGATCTGAGCCATTCGAAGAATATGCGAAGCAAATTGGTTCCTGA 1098 0.4426 MGLHRMQNQDMGLVLSTDAKPRLRWTTELHQRFVEAVTQLGGAEKATPKSLMRMMGVPELTLYHLKSHLQKYRLGKNQQSETCSDIKQEDFTEVDYRESEIRGGHISGEIMGRTHKQINESLQIAQALQMQMEVQKKLHEQIEVQRHLQLRIEAQGKYLQSILKKAQETLAGYNSSSMGLEAAKAELSELVSMVDTRCSSASLSGLTEIGGLSLIIEGKRSMRGADCSMDSSLTSSESSGRKDEKLQKLESGDNHEYTRTSAVLPLVEIDPNGSSHCKTGSSSRVGGRKRSGSTISDETCVEQPSTKRSSPHQEKPVNEFRKLGLSEELDLNRKYPNEMDSGWQGLDLNCRGSEPFEEYAKQIGS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01096 365 MobiDBLite consensus disorder prediction 237 255 - -
Eupl04g01096 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 292 IPR044848 GO:0003700
Eupl04g01096 365 Coils Coil 125 145 - -
Eupl04g01096 365 MobiDBLite consensus disorder prediction 225 318 - -
Eupl04g01096 365 Pfam Myb-like DNA-binding domain 23 73 IPR001005 -
Eupl04g01096 365 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Eupl04g01096 365 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Eupl04g01096 365 Gene3D - 19 78 - -
Eupl04g01096 365 FunFam Myb family transcription factor 19 77 - -
Eupl04g01096 365 MobiDBLite consensus disorder prediction 274 307 - -
Eupl04g01096 365 Pfam MYB-CC type transfactor, LHEQLE motif 122 169 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01096 Eupl-Chr4 16767899 16773121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01096 11 322 G2-like Transcription Factor Family AT1G69580 48.476 8.05e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl04g01096 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01096 - - nnu:104597653 457.988