Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01081 ATGGAGACCATACCGACCCAAAATGTATTCCAAGATGATTTTTACGGTGGGTATGAATATGAGTTTGGAGTTTTGGATGAACTAGGTGTTGGGTTGGAAGCAGAGAAACAGATTGTGTTGTATAACAATGGAGATGGTGGTGAGGAATTGATGAAAGAGAAGAAGGTGAAGAGGTGCAGAGAAGCGAATAAGAATATAAGTTCCAATGATTTATCCCGTAATACTATCTCCCGTTACTTTTACATGCCCATAACACAAGCTGCAAAGGAGCTTAACGTTGGGTTGACACTGTTGAAGAAGAGGTGTAGGGAGTTGGGTATCCCTAGATGGCCCCATAGAAAGTTGATGAGCTTGCGAACCCTCATCAGTAACGTCCAGGAAATGGGGAGGGAGGAAGGAGAAACAAGAGATTCAAAGATACGAGACGCTGTAGAGTTGTTGGAGCAACAAAGGAAGTTGGTGGAGGAGATGCCAGGGATGCAACTTGAGGAGAAAACAAGGAAGCTCAGACAAGCTTGTTTCAAGGCAAACTACAAGAGAAGAAGACTTACGGGGGATGGTGGACTTGCAATCTCCCCCTACAATCCATACCGGGTCACGGAAGAGTTCATGGATCCATTCGAGGCAAAGAAGTCCAATCGGAAGCTTAAAGCCTAA 657 0.4475 METIPTQNVFQDDFYGGYEYEFGVLDELGVGLEAEKQIVLYNNGDGGEELMKEKKVKRCREANKNISSNDLSRNTISRYFYMPITQAAKELNVGLTLLKKRCRELGIPRWPHRKLMSLRTLISNVQEMGREEGETRDSKIRDAVELLEQQRKLVEEMPGMQLEEKTRKLRQACFKANYKRRRLTGDGGLAISPYNPYRVTEEFMDPFEAKKSNRKLKA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01081 218 PANTHER PROTEIN RKD4 68 185 IPR044607 GO:0003700
Eupl04g01081 218 Pfam RWP-RK domain 71 118 IPR003035 -
Eupl04g01081 218 ProSiteProfiles RWP-RK domain profile. 51 139 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01081 Eupl-Chr4 16576709 16578504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01081 57 185 AtRKD Transcription Factor Family AT1G18790 61.832 1.29e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Eupl04g01081 RWP-RK 3.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01081 - - nnu:104598204 229.95